RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 IL11RAQ14626 422 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 DUSP7Q16829 419 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 SLC36A3Q495N2 470 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 TRMT12Q53H54 448 aaKnown RBP12.59□□□□□ -0.39
CCDC197-201ENST00000359253 DHRS4L2Q6PKH6 230 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 FAM111BQ6SJ93 734 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 GALNT10Q86SR1 603 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 LINC00471Q8N535 108 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 OIT3Q8WWZ8 545 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ADAMTS14Q8WXS8 1223 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ART5Q96L15 291 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PIP5K1AQ99755 562 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PSD2Q9BQI7 771 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ADI1Q9BV57 179 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 SAP130Q9H0E3 1048 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 EQTNQ9NQ60 294 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 TOR4AQ9NXH8 423 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 KLHL28Q9NXS3 571 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PRODH2Q9UF12 536 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 SLC13A4Q9UKG4 626 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
CCDC197-201ENST00000359253 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
CCDC197-201ENST00000359253 ARRDC5A6NEK1 342 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 TMX2-CTNND1H3BSU7 103 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 STX11O75558 287 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 RFPL3O75679 317 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 H6PDO95479 791 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 LGI1O95970 557 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 THBS1P07996 1170 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CHRM4P08173 479 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 FTH1P19P0C7X4 201 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 PABPC4LP0CB38 370 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 ANXA8P13928 327 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 S1PR1P21453 382 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 MYF6P23409 242 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 IFNA8P32881 189 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 RORAP35398 523 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SOX18P35713 384 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CHN2P52757 468 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 ID2Q02363 134 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 FUT7Q11130 342 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 LARS2Q15031 903 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 EIPR1Q53HC9 387 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 OTUD3Q5T2D3 398 aaPredicted RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CARM1Q86X55 608 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CHERPQ8IWX8 916 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 PEX5LQ8IYB4 626 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 OR10Q1Q8NGQ4 319 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 APOBEC4Q8WW27 367 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SLC9A6Q92581 669 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 YIPF4Q9BSR8 244 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 POLR2J2Q9GZM3 115 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SLC38A1Q9H2H9 487 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 ADAP2Q9NPF8 381 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 LANCL2Q9NS86 450 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SCOCQ9UIL1 159 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
CCDC197-201ENST00000359253 CNOT1A5YKK6 2376 aaKnown RBP12.58□□□□□ -0.4
CCDC197-201ENST00000359253 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 IGLV3-12A0A075B6K2 115 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 SPAARA0A1B0GVQ0 90 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 TNFRSF11BO00300 401 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 DLGAP1O14490 977 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 JRKO75564 520 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 CBX7O95931 251 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 ACP2P11117 423 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 FGF5P12034 268 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 RRM2P31350 389 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC197-201ENST00000359253 PSPHP78330 225 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 POU6F2P78424 691 aaPredicted RBP12.57□□□□□ -0.4
CCDC197-201ENST00000359253 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
CCDC197-201ENST00000359253 FUT5Q11128 374 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 DUSP8Q13202 625 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 IL18R1Q13478 541 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 DUSP5Q16690 384 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF311Q5JNZ3 666 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 RPS26P11Q5JNZ5 115 aaPredicted RBP12.57□□□□□ -0.4
CCDC197-201ENST00000359253 C6orf52Q5T4I8 152 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 KRT80Q6KB66 452 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF605Q86T29 641 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 SLCO6A1Q86UG4 719 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 GALNT15Q8N3T1 639 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 COX18Q8N8Q8 333 aa12.57□□□□□ -0.4
CCDC197-201ENST00000359253 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms