RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ABCC6O95255 1503 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 OR6C6A6NF89 314 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF487B1APH4 448 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 STC2O76061 302 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ADAP00813 363 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 RCAN2Q14206 197 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF423Q2M1K9 1284 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 BLOC1S3Q6QNY0 202 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF384Q8TF68 577 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 RPH3AQ9Y2J0 694 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 LMO7Q8WWI1 1683 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 MDFIC2A0A1B0GVS7 189 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ALDH3B2P48448 385 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 METTL2BQ6P1Q9 378 aaKnown RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 STK35Q8TDR2 534 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ABRACLQ9P1F3 81 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 NFS1Q9Y697 457 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 AQP2P41181 271 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 JAG1P78504 1218 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 HYAL4Q2M3T9 481 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ACBD7Q8N6N7 88 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 DRAXINQ8NBI3 349 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 LRIG1Q96JA1 1093 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 BOCQ9BWV1 1114 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 MEPEQ9NQ76 525 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ASF1BQ9NVP2 202 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 SLC1A7O00341 560 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 PRKYO43930 277 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 RBMS1P29558 406 aaKnown RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 NKX2-5P52952 324 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 KIF18BQ86Y91 864 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 PRR22Q8IZ63 422 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 OR52N2Q8NGI0 321 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 NETO1Q8TDF5 533 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 SAMD8Q96LT4 415 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 CCNL2Q96S94 520 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ST6GALNAC5Q9BVH7 336 aa17.45■□□□□ 0.38
SHANK1-202ENST00000359082 SAV1Q9H4B6 383 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-202ENST00000359082 ACOT7O00154 380 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 AK1P00568 194 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 AGTR1P30556 359 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 GABARAPL2P60520 117 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 RNASE10Q5GAN6 216 aaKnown RBP17.44■□□□□ 0.38
SHANK1-202ENST00000359082 AKR1C8PQ5T2L2 129 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 PGM2L1Q6PCE3 622 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 OR4D6Q8NGJ1 314 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 DPH1Q9BZG8 443 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 BPIP17213 487 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 FUNDC2Q9BWH2 189 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 A8MVJ9 347 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 HHLA1C9JL84 531 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 ACTL6BO94805 426 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 CDKN2CP42773 168 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 MTNR1AP48039 350 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 SOX4Q06945 474 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-202ENST00000359082 BADQ92934 168 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 ACTRT3Q9BYD9 372 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 ATG12O94817 140 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 CD79AP11912 226 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 SFTPDP35247 375 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 RIPPLY1Q0D2K3 151 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 BCL2A1Q16548 175 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 PCGF3Q3KNV8 242 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF695Q8IW36 515 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 APIPQ96GX9 242 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 PAAF1Q9BRP4 392 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 RBM24Q9BX46 236 aaKnown RBP17.44■□□□□ 0.38
SHANK1-202ENST00000359082 CDH20Q9HBT6 801 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 KIAA0355O15063 1070 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 GPR32O75388 356 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 SOX9P48436 509 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 TEX26Q8N6G2 289 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 METTL25Q8N6Q8 603 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 OR56B2PQ8NGI1 322 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 OR51L1Q8NGJ5 315 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 OR2T4Q8NH00 348 aa17.44■□□□□ 0.38
SHANK1-202ENST00000359082 NANOS1Q8WY41 292 aaKnown RBP17.44■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF888P0CJ79 500 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-202ENST00000359082 DCUN1D4Q92564 292 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 GCDHQ92947 438 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-202ENST00000359082 FAM86C1Q9NVL1 165 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF840PA6NDX5 716 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF43P17038 809 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 SGSHP51688 502 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 MINDY1Q8N5J2 469 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 SLC45A3Q96JT2 553 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 TRAV18A0A075B6X5 111 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 PRAMEF2O60811 474 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 RFPL2O75678 378 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CSF2RAP15509 400 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CD53P19397 219 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CD70P32970 193 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 NCS1P62166 190 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CCBE1Q6UXH8 406 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-202ENST00000359082 KBTBD6Q86V97 674 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 ANKRD13BQ86YJ7 626 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 STARD5Q9NSY2 213 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 SMOXQ9NWM0 555 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 LRRTM2O43300 516 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms