RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ABHD2P08910 425 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 CAMK2DQ13557 499 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 GBX1Q14549 363 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 CHRFAM7AQ494W8 412 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 KBTBD6Q86V97 674 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 AVL9Q8NBF6 648 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 TTLQ8NG68 377 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 NETO1Q8TDF5 533 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 HHIPL1Q96JK4 782 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 RAB11FIP5Q9BXF6 653 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 NUAK1O60285 661 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 RAB36O95755 333 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 AMY2BP19961 511 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 OGNP20774 298 aaKnown RBP6.97□□□□□ -1.29
VPS13A-202ENST00000357409 C5AR1P21730 350 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 AKR1C2P52895 323 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 SWT1Q5T5J6 900 aaKnown RBP6.97□□□□□ -1.29
VPS13A-202ENST00000357409 KIAA0930Q6ICG6 404 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-202ENST00000357409 MAMDC4Q6UXC1 1216 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 YRDCQ86U90 279 aaKnown RBP6.97□□□□□ -1.29
VPS13A-202ENST00000357409 OR2A12Q8NGT7 310 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 TMEM19Q96HH6 336 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 NPY6RQ99463 290 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 TRMOQ9BU70 441 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 PLEKHA3Q9HB20 300 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF160Q9HCG1 818 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 ADAM18Q9Y3Q7 739 aa6.97□□□□□ -1.29
VPS13A-202ENST00000357409 GFRA2O00451 464 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 AQP7O14520 342 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 IFNA17P01571 189 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 S100A2P29034 98 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 SLC6A6P31641 620 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 SPIN4Q56A73 249 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 A3GALT2U3KPV4 340 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 LMTK2Q8IWU2 1503 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 HMX3A6NHT5 357 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 NPHS1O60500 1241 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 C9orf50Q5SZB4 431 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 NIPAL3Q6P499 406 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 PROKR1Q8TCW9 393 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 LRRC3Q9BY71 257 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 CHST11Q9NPF2 352 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 PRMT8Q9NR22 394 aaPredicted RBP6.96□□□□□ -1.29
VPS13A-202ENST00000357409 B3GNT2Q9NY97 397 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 AGLP35573 1532 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 PMM2O15305 246 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 ZNF12P17014 697 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 RORAP35398 523 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 GRIA2P42262 883 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 VASPP50552 380 aaPredicted RBP6.96□□□□□ -1.29
VPS13A-202ENST00000357409 CTSCP53634 463 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 MBTPS1Q14703 1052 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 NADK2Q4G0N4 442 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 TMEM69Q5SWH9 247 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 OR2T5Q6IEZ7 315 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 ASCC1Q8N9N2 400 aaKnown RBP6.96□□□□□ -1.29
VPS13A-202ENST00000357409 OR2T29Q8NH02 315 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 C16orf78Q8WTQ4 265 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 RSC1A1Q92681 617 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.29
VPS13A-202ENST00000357409 PINK1Q9BXM7 581 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 DCSTAMPQ9H295 470 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 UFSP2Q9NUQ7 469 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 AP3M1Q9Y2T2 418 aa6.96□□□□□ -1.29
VPS13A-202ENST00000357409 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 MAN2B1O00754 1011 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 AHRP35869 848 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 RPL5P46777 297 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CX3CR1P49238 355 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 POU4F2Q12837 409 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 UNC50Q53HI1 259 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NHSL2Q5HYW2 709 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 BCDIN3DQ7Z5W3 292 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 SCGB1C1Q8TD33 95 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF514Q96K75 400 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 TREX2Q9BQ50 279 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZBTB26Q9HCK0 441 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 MRPL22Q9NWU5 206 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 PRODH2Q9UF12 536 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 SLC7A8Q9UHI5 535 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 RPL36Q9Y3U8 105 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CNMDO75829 334 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 POU3F2P20265 443 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 RIDAP52758 137 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 P2RY14Q15391 338 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 FAM199XQ6PEV8 388 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 COX15Q7KZN9 410 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 PARS2Q7L3T8 475 aaKnown RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 CCL4L1Q8NHW4 92 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NKD2Q969F2 451 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 NAA11Q9BSU3 229 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-202ENST00000357409 MDFIC2A0A1B0GVS7 189 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 A0A1W2PR80 420 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 BET1O15155 118 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF254O75437 659 aa6.96□□□□□ -1.3
VPS13A-202ENST00000357409 C7P10643 843 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms