RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 VAPAQ9P0L0 249 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 PCDHGA8Q9Y5G5 932 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 TRAV18A0A075B6X5 111 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 MEGF11A6BM72 1044 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 F8W036 122 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ARPC5O15511 151 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 CLEC3AO75596 197 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 BLOC1S1P78537 153 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ALG8Q9BVK2 526 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 NELFAQ9H3P2 528 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 BRF2Q9HAW0 419 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 AP1M2Q9Y6Q5 423 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 C2orf78A6NCI8 922 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 FGF18O76093 207 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 CDK1P06493 297 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 RPS17P08708 135 aaKnown RBP14.1□□□□□ -0.15
CHD4-201ENST00000357008 FOXA1P55317 472 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 PLCXD2Q0VAA5 305 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 GK2Q14410 553 aaPredicted RBP14.1□□□□□ -0.15
CHD4-201ENST00000357008 ZNF789Q5FWF6 425 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 PHF19Q5T6S3 580 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 HES5Q5TA89 166 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 FIGNL1Q6PIW4 674 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 CD200R1Q8TD46 325 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ARL11Q969Q4 196 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 TRIM64A6NGJ6 449 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 NPIPA2E9PIF3 369 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 NPIPA3F8WFD2 350 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 TP53I11O14683 189 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 SCO2O43819 266 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CDC123O75794 336 aaPredicted RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 SLC22A5O76082 557 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 HEXBP07686 556 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 NKX3-2P78367 333 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 EMX1Q04741 257 aaPredicted RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 PHB2Q99623 299 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 BOCQ9BWV1 1114 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ACTRT3Q9BYD9 372 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 TLR9Q9NR96 1032 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ROBO1Q9Y6N7 1651 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 OR6C74A6NCV1 312 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 F5H5P2 479 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 RIN1Q13671 783 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 RNF111Q6ZNA4 994 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 B3GNT7Q8NFL0 401 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CHPT1Q8WUD6 406 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 C16orf58Q96GQ5 468 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 MYH2Q9UKX2 1941 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 TVP23AA6NH52 213 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 OR5K4A6NMS3 321 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CDK2P24941 298 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 FPGSQ05932 587 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 TUBB3Q13509 450 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 LEG1Q6P5S2 330 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 TBC1D15Q8TC07 691 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 KLHDC7BQ96G42 594 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 SAMD8Q96LT4 415 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 THSD1Q9NS62 852 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CNOT2Q9NZN8 540 aaKnown RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 A0A1B0GVG6 124 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 MEIOCA2RUB1 952 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 OR8U9P0C7N5 309 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 PRSS56P0CW18 603 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ARL6IP1Q15041 203 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 AGAP6Q5VW22 663 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 DAZLQ92904 295 aaKnown RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 AGAP4Q96P64 663 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 OR51J1Q9H342 316 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 GJD2Q9UKL4 321 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 KNDC1Q76NI1 1749 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 RNASET2O00584 256 aaKnown RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 B4GAT1O43505 415 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 SOX3P41225 446 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 PCGF3Q3KNV8 242 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CFAP77Q6ZQR2 320 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CPOQ8IVL8 374 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 HAVCR2Q8TDQ0 301 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 WDR92Q96MX6 357 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ATE1O95260 518 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 CRHBPP24387 322 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ARRB1P49407 418 aaPredicted RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 SUOXP51687 545 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 ZXDBP98169 803 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 NNATQ16517 81 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 FAM69AQ5T7M9 428 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 SLC7A13Q8TCU3 470 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 HHATLQ9HCP6 504 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 FANCFQ9NPI8 374 aa14.09□□□□□ -0.15
CHD4-201ENST00000357008 UBE2J1Q9Y385 318 aaPredicted RBP14.09□□□□□ -0.15
CHD4-201ENST00000357008 FZD9O00144 591 aa14.08□□□□□ -0.15
CHD4-201ENST00000357008 KLHDC8AQ8IYD2 350 aa14.08□□□□□ -0.15
CHD4-201ENST00000357008 SLC7A5P1Q8MH63 180 aa14.08□□□□□ -0.15
CHD4-201ENST00000357008 KCNS2Q9ULS6 477 aa14.08□□□□□ -0.15
CHD4-201ENST00000357008 PBX2P40425 430 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 ELAVL3Q14576 367 aaKnown RBP14.08□□□□□ -0.16
CHD4-201ENST00000357008 OR5H2Q8NGV7 314 aa14.08□□□□□ -0.16
CHD4-201ENST00000357008 OR5W2Q8NH69 310 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms