RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MAFIPQ8WZ33 124 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 MSI2Q96DH6 328 aaKnown RBP5.27□□□□□ -1.57
PTPRD-202ENST00000356435 RANBP9Q96S59 729 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 DOHHQ9BU89 302 aa5.27□□□□□ -1.57
PTPRD-202ENST00000356435 NUDT6P53370 316 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RAB4BP61018 213 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF169Q14929 603 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PRAMEF8Q5VWM4 474 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PRAMEF7Q5VXH5 474 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 EPGNQ6UW88 154 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 VTCN1Q7Z7D3 282 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 CNEP1R1Q8N9A8 125 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 GALNT6Q8NCL4 622 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SORCS1Q8WY21 1168 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 BIRC7Q96CA5 298 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 OR5B2Q96R09 309 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HAO2Q9NYQ3 351 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF223Q9UK11 482 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 LILRB5O75023 590 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HTR3BO95264 441 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HOXD12P35452 270 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 GCGRP47871 477 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ACTBP60709 375 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ACTG1P63261 375 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RHDQ02161 417 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 COL28A1Q2UY09 1125 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SPANXN4Q5MJ08 99 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FIGLAQ6QHK4 219 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ELMOD2Q8IZ81 293 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SMG8Q8ND04 991 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 DDX1Q92499 740 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FIZ1Q96SL8 496 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TWSG1Q9GZX9 223 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SLC39A1Q9NY26 324 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FUOMA2VDF0 154 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SLC34A2O95436 690 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 IL1R2P27930 398 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HNRNPFP52597 415 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PHC1P78364 1004 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SLC25A11Q02978 314 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 EIF2B1Q14232 305 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ATG9BQ674R7 924 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 LEG1Q6P5S2 330 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TMEM205Q6UW68 189 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RTL10Q7L3V2 364 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 DPY19L4Q7Z388 723 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PKD1L3Q7Z443 1732 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 OR10T2Q8NGX3 314 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 OR8K5Q8NH50 307 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HAVCR2Q8TDQ0 301 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF431Q8TF32 576 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 DUS3LQ96G46 650 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RGCCQ9H4X1 137 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 CWH43Q9H720 699 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 UNKLQ9H9P5 680 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 MYH8P13535 1937 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 C2orf78A6NCI8 922 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF840PA6NDX5 716 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 CLCA1A8K7I4 914 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 C17orf105B2RV13 164 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TMEM233B4DJY2 109 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SYT7O43581 403 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 WDPCPO95876 746 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PAK4O96013 591 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TMEM225BP0DP42 221 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RAB3AP20336 220 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FUT4P22083 530 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 GKP32189 559 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ADARB1P78563 741 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ATXN7L3Q14CW9 347 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF597Q96LX8 424 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TMEM74Q96NL1 305 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 VRK1Q99986 396 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SYT3Q9BQG1 590 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 OPA3Q9H6K4 179 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FAM118AQ9NWS6 357 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ATXN7L1Q9ULK2 861 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 LTN1O94822 1766 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 RNF212BA8MTL3 300 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 H3BML4 177 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 H3BSA7 217 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 FOXE1O00358 373 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 HPRP00739 348 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 MTHFD2P13995 350 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 TSFMP43897 325 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF33BQ06732 778 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 DEFB133Q30KQ1 61 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF678Q5SXM1 525 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PXKQ7Z7A4 578 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 WDR20Q8TBZ3 569 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ECHDC3Q96DC8 303 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SENP5Q96HI0 755 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 METTL2AQ96IZ6 378 aaKnown RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 ENKD1Q9H0I2 346 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 PRMT8Q9NR22 394 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-202ENST00000356435 POLE4Q9NR33 117 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 CUTCQ9NTM9 273 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 EMC9Q9Y3B6 208 aa5.26□□□□□ -1.57
PTPRD-202ENST00000356435 SIPA1L3O60292 1781 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms