RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SYT14Q8NB59 555 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 OR8K5Q8NH50 307 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SCAMP4Q969E2 229 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 TSPAN10Q9H1Z9 355 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-201ENST00000355497 RETREG1Q9H6L5 497 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 KCNK12Q9HB15 430 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SLIT2O94813 1529 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 JRKO75564 520 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 CHATP28329 748 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 PTPN6P29350 595 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 LMAN2Q12907 356 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 TLDC1Q6P9B6 456 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 PRSS48Q7RTY5 328 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 BDKRB2P30411 391 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 RAB28P51157 221 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 DOC2AQ14183 400 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 FAM83FQ8NEG4 500 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-201ENST00000355497 CIDECQ96AQ7 238 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SGCZQ96LD1 299 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 DPH7Q9BTV6 452 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 SMOXQ9NWM0 555 aa14.16□□□□□ -0.14
LMX1B-201ENST00000355497 LYRM1O43325 122 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 S1PR4O95977 384 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 CAV2P51636 162 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SHFQ7M4L6 423 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SAMD11Q96NU1 681 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 VRK1Q99986 396 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SEC14L5O43304 696 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF254O75437 659 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 KNG1P01042 644 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 CLDN8P56748 225 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 MELKQ14680 651 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 AARDQ4LEZ3 155 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 OR13J1Q8NGT2 312 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 OR1S1Q8NH92 325 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 HOXD1Q9GZZ0 328 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SYNPO2LQ9H987 977 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SPHK2Q9NRA0 654 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 ASB4Q9Y574 426 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 FAM227AF5H4B4 570 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 FOXD2O60548 495 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SPDEFO95238 335 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 TFP02787 698 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 CDKN2DP55273 166 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 GSCP56915 257 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 FXYD4P59646 89 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 ZNF791Q3KP31 576 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 CMTM1Q8IZ96 169 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 VWA5B2Q8N398 1253 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 RADILQ96JH8 1075 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SPIN2AQ99865 258 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SPIN2BQ9BPZ2 258 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 TEX10Q9NXF1 929 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 OR1A2Q9Y585 309 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 NUBP2Q9Y5Y2 271 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 NFS1Q9Y697 457 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 MROH2AA6NES4 1674 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 GJE1A6NN92 205 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 CRTAPO75718 401 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 P04436 131 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 RRAS2P62070 204 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-201ENST00000355497 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 HUS1BQ8NHY5 278 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SLC6A16Q9GZN6 736 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 FBRSQ9HAH7 460 aa14.15□□□□□ -0.14
LMX1B-201ENST00000355497 SLC34A2O95436 690 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 PENKP01210 267 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 NKX2-5P52952 324 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 NCS1P62166 190 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 METTL11BQ5VVY1 283 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 FAM217AQ8IXS0 508 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 ECHDC3Q96DC8 303 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 GPN2Q9H9Y4 310 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 B3GNT3Q9Y2A9 372 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 A0A1W2PP55 124 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 KLHL33A6NCF5 533 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 SULT1C2O00338 296 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 ALDOAP04075 364 aaKnown RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 FDXRP22570 491 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 BMXP51813 675 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 EIF2B1Q14232 305 aaKnown RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 TSPYL5Q86VY4 417 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 SGPP2Q8IWX5 399 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 CREB3L4Q8TEY5 395 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 SPTSSAQ969W0 71 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 TMEM19Q96HH6 336 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 METTL2AQ96IZ6 378 aaKnown RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 IL17FQ96PD4 163 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 BCL7BQ9BQE9 202 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 RPS10P5Q9NQ39 176 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 UBFD1O14562 309 aaKnown RBP14.14□□□□□ -0.15
LMX1B-201ENST00000355497 SLC22A5O76082 557 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 PPP1R3DO95685 299 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 SOX3P41225 446 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 ADAMTS19Q8TE59 1207 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 ARL5BQ96KC2 179 aa14.14□□□□□ -0.15
LMX1B-201ENST00000355497 ZBTB20Q9HC78 741 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms