RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CRELD1Q96HD1 420 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GABARAPL1Q9H0R8 117 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 OR2AG1Q9H205 316 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 C5AR2Q9P296 337 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 EXO1Q9UQ84 846 aaKnown RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 CFAP20Q9Y6A4 193 aaKnown RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 SH3D21A4FU49 640 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ZNF197O14709 1029 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CXCL14O95715 111 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CTSLP07711 333 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 TIMP2P16035 220 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ZNF8P17098 575 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 RHCEP18577 417 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 PRPH2P23942 346 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 TIA1P31483 386 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMG6-202ENST00000354901 FNTBP49356 437 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SLC5A12Q1EHB4 618 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 LGALSLQ3ZCW2 172 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 CLLU1Q5K131 121 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GRHL2Q6ISB3 625 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 MED27Q6P2C8 311 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 TNFAIP8L2Q6P589 184 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 HMGN2P46Q86SG4 172 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 UXS1Q8NBZ7 420 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 KREMEN2Q8NCW0 462 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 PPCDCQ96CD2 204 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 C12orf66Q96MD2 445 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GPR137Q96N19 417 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SECISBP2Q96T21 854 aaKnown RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 ABCG5Q9H222 651 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 PCOLCE2Q9UKZ9 415 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SPIN1Q9Y657 262 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 GON4LQ3T8J9 2241 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 A0A075B6Q4 140 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 K7ESM1 405 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 MMP20O60882 483 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SLCO2B1O94956 709 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ALDOBP05062 364 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 S100A6P06703 90 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CLTBP09497 229 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ZP3P21754 424 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SRP9P49458 86 aaKnown RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 SELENOWP63302 87 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SLC7A9P82251 487 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 IQCCQ4KMZ1 466 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 NLRC3Q7RTR2 1065 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ZNF367Q7RTV3 350 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 LSRQ86X29 649 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 PM20D2Q8IYS1 436 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CLRN3Q8NCR9 226 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GOT1L1Q8NHS2 421 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 BTN2A2Q8WVV5 523 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GLYATL1Q969I3 302 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ARMC5Q96C12 935 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ELMOD3Q96FG2 381 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 GAS2L1Q99501 681 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 PIGUQ9H490 435 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 A0A0G2JN53 185 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 C1orf226A1L170 272 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PRAMEF25A6NGN4 478 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PRR23D1E9PI22 279 aaPredicted RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 CCNB2O95067 398 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 DHFRP00374 187 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 SEMG1P04279 462 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 S100A9P06702 114 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 FABP1P07148 127 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PRR23D2P0DMB1 279 aaPredicted RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 PEPDP12955 493 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 LAG3P18627 525 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 ASMTP46597 345 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 MEOX2P50222 304 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 AGFG1P52594 562 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 LGALS3BPQ08380 585 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 VEZF1Q14119 521 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 LEXMQ3ZCV2 418 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 IFI44LQ53G44 452 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 RPS26P11Q5JNZ5 115 aaPredicted RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 GCNT6Q5T4J0 391 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 FAHD1Q6P587 224 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 WASH2PQ6VEQ5 465 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 ADIPOR2Q86V24 386 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PAQR7Q86WK9 346 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 STX12Q86Y82 276 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 NXPE2Q96DL1 559 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 HRASLS5Q96KN8 279 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 OPALINQ96PE5 141 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 CRB3Q9BUF7 120 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 CPEB1Q9BZB8 566 aaKnown RBP8.84□□□□□ -0.99
SMG6-202ENST00000354901 ZCCHC4Q9H5U6 513 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 KCNMB2Q9Y691 235 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 ATG2BQ96BY7 2078 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 TMEM229AB2RXF0 380 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 SLC16A5O15375 505 aa8.84□□□□□ -0.99
SMG6-202ENST00000354901 PRMT3O60678 531 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms