RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 LINC00205P59089 165 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SSTP61278 116 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZXDAP98168 799 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CDR2Q01850 454 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GABPAQ06546 454 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FGL1Q08830 312 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NME3Q13232 169 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SRSF5Q13243 272 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GPR17Q13304 367 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HKDC1Q2TB90 917 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 UNC50Q53HI1 259 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TECRLQ5HYJ1 363 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LIPNQ5VXI9 398 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MORN5Q5VZ52 161 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 REG3GQ6UW15 175 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF562Q6V9R5 426 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 C9orf139Q6ZV77 190 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 EFL1Q7Z2Z2 1120 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC36Q8IYA8 594 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 BBS5Q8N3I7 341 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM99Q8N816 258 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF321PQ8N8H1 164 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SMAP2Q8WU79 429 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SLC25A36Q96CQ1 311 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CNRIP1Q96F85 164 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NACA2Q9H009 215 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ALG9Q9H6U8 611 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PLEKHA3Q9HB20 300 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MED17Q9NVC6 651 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MYRFQ9Y2G1 1151 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TTC21AQ8NDW8 1320 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LOC390937A0A1W2PQ73 354 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 OR52A4PA6NMU1 304 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CTAGE5O15320 804 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 DUSP11O75319 330 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 BCAS1O75363 584 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TRMUO75648 421 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 STK17BO94768 372 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MFN2O95140 757 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NADKO95544 446 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CRYABP02511 175 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ANXA3P12429 323 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GP1BBP13224 206 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MAP2K2P36507 400 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FEN1P39748 380 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PRRX1P54821 245 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HAND2P61296 217 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SRYQ05066 204 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LTBQ06643 244 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ILKQ13418 452 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CUL1Q13616 776 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FAM189A2Q15884 450 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MRPL23Q16540 153 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 C16orf87Q6PH81 154 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 Q6ZVQ6 151 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SRRM1Q8IYB3 904 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HCAR2Q8TDS4 363 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LRRC15Q8TF66 581 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FAM3CQ92520 227 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ST6GAL2Q96JF0 529 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF778Q96MU6 729 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 VSTM2LQ96N03 204 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TECTBQ96PL2 329 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MTMR9Q96QG7 549 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FICDQ9BVA6 458 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GLT8D2Q9H1C3 349 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LIME1Q9H400 295 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MARCH7Q9H992 704 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FAM114A2Q9NRY5 505 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GPR83Q9NYM4 423 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MIS18AQ9NYP9 233 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TAS2R16Q9NYV7 291 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FBXL4Q9UKA2 621 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 A0A0C4DFX4 3053 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 BPTFQ12830 3046 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TTC21BQ7Z4L5 1316 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 TRPM2O94759 1503 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SAA2-SAA4A0A096LPE2 208 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 OR5H15A6NDH6 313 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF724A8MTY0 619 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LACTBL1A8MY62 500 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PPIAL4DF5H284 164 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 EIF3HO15372 352 aaKnown RBP eCLIP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 BUD23O43709 281 aaKnown RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 FZD7O75084 574 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 SEC24AO95486 1093 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4-39P01824 125 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 HIST1H2AGP0C0S8 130 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 NT5EP21589 574 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 CHI3L1P36222 383 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 GRIA1P42261 906 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 MFGE8Q08431 387 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 COX10Q12887 443 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 EFTUD2Q15029 972 aaKnown RBP eCLIP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF74Q16587 644 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 PDLIM3Q53GG5 364 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LCN1P1Q5VSP4 162 aa1.42□□□□□ -2.18
BRCA1-202ENST00000354071 LEKR1Q6ZMV7 388 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms