RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PSMA8Q8TAA3 256 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 SPPL2AQ8TCT8 520 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 DIO2Q92813 273 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 FAM120BQ96EK7 910 aaKnown RBP14.01□□□□□ -0.17
UBE3B-201ENST00000340074 GIMAP5Q96F15 307 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 EBF4Q9BQW3 602 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 LMF2Q9BU23 707 aaKnown RBP14.01□□□□□ -0.17
UBE3B-201ENST00000340074 CXorf36Q9H7Y0 433 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 TUBA8Q9NY65 449 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-201ENST00000340074 SEC14L3Q9UDX4 400 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 OR10H1Q9Y4A9 318 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 PCNX3Q9H6A9 2034 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 C9JVG2 144 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 E9PBE3 544 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 NPIPA5E9PKD4 350 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 UBDO15205 165 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 HS6ST1O60243 411 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 TSPAN2O60636 221 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 UGT2B11O75310 529 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 REM1O75628 298 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 IDO1P14902 403 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 IL12AP29459 219 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 AQP5P55064 265 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 PRR5P85299 388 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 PLGLB1Q02325 96 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 FOXO1Q12778 655 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 GAB1Q13480 694 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
UBE3B-201ENST00000340074 ZNHIT3Q15649 155 aaPredicted RBP14□□□□□ -0.17
UBE3B-201ENST00000340074 DPY19L1Q2PZI1 675 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 EIF2S3LQ2VIR3 472 aaKnown RBP14□□□□□ -0.17
UBE3B-201ENST00000340074 FAM174BQ3ZCQ3 159 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 SPANXN4Q5MJ08 99 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 ACAD11Q709F0 780 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 NUP54Q7Z3B4 507 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 SIAH3Q8IW03 269 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 ARFGAP2Q8N6H7 521 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 HGDQ93099 445 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 GPR137Q96N19 417 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 COL21A1Q96P44 957 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 MS4A4EQ96PG1 132 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 SECISBP2Q96T21 854 aaKnown RBP14□□□□□ -0.17
UBE3B-201ENST00000340074 TTTY12Q9BZ98 90 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 NEUROD4Q9HD90 331 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 TCF7L2Q9NQB0 619 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 ZCCHC3Q9NUD5 404 aaKnown RBP14□□□□□ -0.17
UBE3B-201ENST00000340074 NPIPA1Q9UND3 350 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 POLEQ07864 2286 aa14□□□□□ -0.17
UBE3B-201ENST00000340074 OR6C70A6NIJ9 312 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 RNASET2O00584 256 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 TFECO14948 347 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 POLR3GO15318 223 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 EDF1O60869 148 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 SCN2BO60939 215 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 UNC5CO95185 931 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 IL12BP29460 328 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 S100A3P33764 101 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 GABRA3P34903 492 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 CASP3P42574 277 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 CCT3P49368 545 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 KCNK10P57789 538 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 KCNJ2P63252 427 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 PSPHP78330 225 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 RPP38P78345 283 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 GSTA3Q16772 222 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 CYP27C1Q4G0S4 372 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 PDCD4Q53EL6 469 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 GFRALQ6UXV0 394 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 ANKRD46Q86W74 232 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 FBXO30Q8TB52 745 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 PRR7Q8TB68 274 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 SLC9A6Q92581 669 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 HOXB13Q92826 284 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 EFHD2Q96C19 240 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 THOC1Q96FV9 657 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 SLC35A4Q96G79 324 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 C16orf58Q96GQ5 468 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 NODALQ96S42 347 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 ADOQ96SZ5 270 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 YIPF4Q9BSR8 244 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 DOHHQ9BU89 302 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 Q9N2J8 555 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 CBLCQ9ULV8 474 aa13.99□□□□□ -0.17
UBE3B-201ENST00000340074 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.99□□□□□ -0.17
UBE3B-201ENST00000340074 PRSS51A0A1B0GVH4 220 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 FAM166BA8MTA8 275 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ASNA1O43681 348 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 GLSO94925 669 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 KRT20P35900 424 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 MAP3K8P41279 467 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 DGKQP52824 942 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 PPIAP62937 165 aaKnown RBP13.98□□□□□ -0.17
UBE3B-201ENST00000340074 GUCY1A3Q02108 690 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 SPDYE7PQ495Y7 208 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 KRTCAP3Q53RY4 240 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 TBCELQ5QJ74 424 aa13.98□□□□□ -0.17
UBE3B-201ENST00000340074 ANXA8L1Q5VT79 327 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms