RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ZNF395Q9H8N7 513 aaPredicted RBP14.19□□□□□ -0.14
LINC01116-202ENST00000339037 TAS2R10Q9NYW0 307 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 CLCF1Q9UBD9 225 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 NDRG3Q9UGV2 375 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 ZNF639Q9UID6 485 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 PACSIN3Q9UKS6 424 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 CES1P1Q9UKY3 287 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 PLLPQ9Y342 182 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
LINC01116-202ENST00000339037 HIVEP2P31629 2446 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 FAM171A2A8MVW0 826 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 A8MXE2 369 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 ARHGEF9O43307 516 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 CBX7O95931 251 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 INHBAP08476 426 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 CHMP24386 653 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 LHX2P50458 406 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 GFRA1P56159 465 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 EEF1A1P68104 462 aaKnown RBP14.18□□□□□ -0.14
LINC01116-202ENST00000339037 SGO1Q5FBB7 561 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 EEF1A1P5Q5VTE0 462 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 CXorf67Q86X51 503 aaPredicted RBP14.18□□□□□ -0.14
LINC01116-202ENST00000339037 PLCZ1Q86YW0 608 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 GRAMD2AQ8IUY3 354 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 SIMC1Q8NDZ2 872 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 OR52R1Q8NGF1 315 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 IFT81Q8WYA0 676 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 KLHL29Q96CT2 875 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 TMCO6Q96DC7 493 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 NSUN5Q96P11 429 aaKnown RBP14.18□□□□□ -0.14
LINC01116-202ENST00000339037 XPR1Q9UBH6 696 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 PRODH2Q9UF12 536 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 PCTPQ9UKL6 214 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 PSME2Q9UL46 239 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 SLC12A4Q9UP95 1085 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
LINC01116-202ENST00000339037 COL6A5A8TX70 2615 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 FRG2CA6NGY1 282 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 OR6C70A6NIJ9 312 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 PLOD2O00469 737 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TO15178 435 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 HEXAP06865 529 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 DRD5P21918 477 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 SRD5A2P31213 254 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 PPICP45877 212 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 STARP49675 285 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 MRPS35P82673 323 aaKnown RBP14.17□□□□□ -0.14
LINC01116-202ENST00000339037 HMGCS1Q01581 520 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 LTB4RQ15722 352 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 GGTA1PQ4G0N0 100 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TRMT12Q53H54 448 aaKnown RBP14.17□□□□□ -0.14
LINC01116-202ENST00000339037 Q5PR19 223 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TAOK1Q7L7X3 1001 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 UHMK1Q8TAS1 419 aaKnown RBP14.17□□□□□ -0.14
LINC01116-202ENST00000339037 DCAKDQ8WVC6 231 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TMBIM1Q969X1 311 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 CTHRC1Q96CG8 243 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 DTNBP1Q96EV8 351 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 SFXN2Q96NB2 322 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 COL21A1Q96P44 957 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 ZBTB26Q9HCK0 441 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 DKKL1Q9UK85 242 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TMCO1Q9UM00 188 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 WIF1Q9Y5W5 379 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 ZNF780BQ9Y6R6 833 aa14.17□□□□□ -0.14
LINC01116-202ENST00000339037 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 A0A1W2PNV4 684 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 POC1B-GALNT4F8VUJ3 575 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 STX16-NPEPL1H3BU86 382 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 STX16O14662 325 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 REM1O75628 298 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 TNFSF13O75888 250 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 RBP1P09455 135 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 PCSK2P16519 638 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 ZNF708P17019 499 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 ALDH9A1P49189 494 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 EMDP50402 254 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 SERPINB9P50453 376 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 CLDN18P56856 261 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 DUSP2Q05923 314 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 GALNT1Q10472 559 aaPredicted RBP14.16□□□□□ -0.14
LINC01116-202ENST00000339037 FAM219BQ5XKK7 198 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 FAM180BQ6P0A1 224 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 RPS27LQ71UM5 84 aaKnown RBP14.16□□□□□ -0.14
LINC01116-202ENST00000339037 MILR1Q7Z6M3 343 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 P3H2Q8IVL5 708 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 OR4F6Q8NGB9 312 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 ARSGQ96EG1 525 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 CNRIP1Q96F85 164 aaPredicted RBP14.16□□□□□ -0.14
LINC01116-202ENST00000339037 FAIM2Q9BWQ8 316 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 FARSBQ9NSD9 589 aaKnown RBP14.16□□□□□ -0.14
LINC01116-202ENST00000339037 FBXL2Q9UKC9 423 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 DLGAP4Q9Y2H0 992 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 GPR55Q9Y2T6 319 aaPredicted RBP14.16□□□□□ -0.14
LINC01116-202ENST00000339037 STAB1Q9NY15 2570 aa14.16□□□□□ -0.14
LINC01116-202ENST00000339037 MED12LQ86YW9 2145 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 A0A1B0GTL3 188 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 TRIM49D1C9J1S8 452 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 MSTNO14793 375 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 SMPD2O60906 423 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms