RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ARRB1P49407 418 aaPredicted RBP13.04□□□□□ -0.32
RTN4-202ENST00000337526 OLAHQ9NV23 265 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ANKMY1Q9P2S6 941 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 CSNK1G3Q9Y6M4 447 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 HYKKA2RU49 373 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 M0R036 132 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ACOT8O14734 319 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 FRS3O43559 492 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 CLUP10909 449 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 DDCP20711 480 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 BCL2L15Q5TBC7 163 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 CYB561A3Q8NBI2 242 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.323e-8■■□□□ 11.5
RTN4-202ENST00000337526 ZNF583Q96ND8 569 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 MROH6A6NGR9 719 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 KLF8O95600 359 aaPredicted RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 HMGN2P05204 90 aaKnown RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ZNF41P51814 821 aaPredicted RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 SPCS2Q15005 226 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 CST6Q15828 149 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 CNIH2Q6PI25 160 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ASB15Q8WXK1 588 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 TEX13CA0A0J9YWL9 993 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 SCO2O43819 266 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ITGAMP11215 1152 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 FGFBP1Q14512 234 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 MORN1Q5T089 497 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 C17orf99Q6UX52 265 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.03□□□□□ -0.325e-9■■■□□ 16.5
RTN4-202ENST00000337526 HSD11B1LQ7Z5J1 315 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 UBQLNLQ8IYU4 475 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ADAMTS19Q8TE59 1207 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ASB11Q8WXH4 323 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 RNF186Q9NXI6 227 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 CCDC85CA6NKD9 419 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 MUSKO15146 869 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 TACR1P25103 407 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 GLP1RP43220 463 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 NR4A2P43354 598 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ART1P52961 327 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 AIMP2Q13155 320 aaKnown RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 SLC22A10Q63ZE4 541 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 C1orf94Q6P1W5 598 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 ZNF283Q8N7M2 679 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 DHRS1Q96LJ7 313 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 MMP28Q9H239 520 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 TMEM185BQ9H7F4 350 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 HMX2A2RU54 273 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTN4-202ENST00000337526 CFIP05156 583 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 CTSCP53634 463 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 NTHL1P78549 312 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 OR6C4Q8NGE1 309 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 OR6Q1Q8NGQ2 317 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 KLF16Q9BXK1 252 aaPredicted RBP13.03□□□□□ -0.32
RTN4-202ENST00000337526 OR2S2Q9NQN1 319 aa13.03□□□□□ -0.32
RTN4-202ENST00000337526 MAS1P04201 325 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 PIM1P11309 404 aaPredicted RBP13.02□□□□□ -0.32
RTN4-202ENST00000337526 TBCEQ15813 527 aaPredicted RBP13.02□□□□□ -0.32
RTN4-202ENST00000337526 ANKRD54Q6NXT1 300 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 Q6ZSR9 355 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 ASB12Q8WXK4 309 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 CPNE2Q96FN4 548 aaPredicted RBP13.02□□□□□ -0.32
RTN4-202ENST00000337526 OR10A4Q9H209 315 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 SYT4Q9H2B2 425 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 PELI2Q9HAT8 420 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 FZD3Q9NPG1 666 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 THSD1Q9NS62 852 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.32
RTN4-202ENST00000337526 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.33
RTN4-202ENST00000337526 DPP6P42658 865 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 SHC2P98077 582 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 CCDC58Q4VC31 144 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 MPP7Q5T2T1 576 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 ALKAL1Q6UXT8 129 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 RNF175Q8N4F7 328 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 METTL25Q8N6Q8 603 aa13.02□□□□□ -0.33
RTN4-202ENST00000337526 OR5D16Q8NGK9 328 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms