RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RGRP47804 291 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 HTRA3P83110 453 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GPRC6AQ5T6X5 926 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 FAM171BQ6P995 826 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GPR155Q7Z3F1 870 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 C6orf120Q7Z4R8 191 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GTPBP8Q8N3Z3 284 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 OR7G3Q8NG95 312 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 DOK4Q8TEW6 326 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 CAMK1GQ96NX5 476 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 DDX31Q9H8H2 851 aaKnown RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 BTAF1O14981 1849 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 SHC1P29353 583 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 AHRP35869 848 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 S100A10P60903 97 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 WDR5P61964 334 aaKnown RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TAP2Q03519 686 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 LMNTD1Q8N9Z9 388 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 POMGNT2Q8NAT1 580 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 RNF31Q96EP0 1072 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 FCRL1Q96LA6 429 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 CRB3Q9BUF7 120 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TRAF4Q9BUZ4 470 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 WDR26Q9H7D7 661 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF639Q9UID6 485 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TRIM64A6NGJ6 449 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 K7ERQ8 282 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 ATXN1LP0C7T5 689 aaKnown RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 GIPRP48546 466 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 MAP2K6P52564 334 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 HTR4Q13639 388 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS45Q7RTY3 260 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TMPRSS12Q86WS5 348 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 RELL2Q8NC24 303 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 KCT2Q8NC54 265 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 OSTF1Q92882 214 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 CD180Q99467 661 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PRODHO43272 600 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 SELPP16109 830 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 GJA1P17302 382 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 AMD1P17707 334 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 HBA1P69905 142 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 SORDQ00796 357 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 TRAM2Q15035 370 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PLK5Q496M5 336 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 ADGRF3Q8IZF5 1079 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 SLC25A18Q9H1K4 315 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 EGLN3Q9H6Z9 239 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 MRPL17Q9NRX2 175 aaKnown RBP12.55□□□□□ -0.4
COL2A1-201ENST00000337299 C14orf105Q9NVL8 296 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PLAGL1Q9UM63 463 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 SHROOM3Q8TF72 1996 aa12.55□□□□□ -0.4
COL2A1-201ENST00000337299 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF821O75541 412 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 LALBAP00709 142 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 EPCAMP16422 314 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 PCSK2P16519 638 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 KHKP50053 298 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 PRR5P85299 388 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TEKQ02763 1124 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 CTSL3PQ5NE16 218 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 SLC44A3Q8N4M1 653 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 OR2T33Q8NG76 320 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 CREB3L4Q8TEY5 395 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 EFCAB11Q9BUY7 163 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 SPNS1Q9H2V7 528 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 TRBV2A0A0J9YWF9 115 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 FZD7O75084 574 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 APOC1P02654 83 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ACADMP11310 421 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GPR17Q13304 367 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GRM7Q14831 915 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 SEC23BQ15437 767 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 KLHL26Q53HC5 615 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 COX20Q5RI15 118 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 APOOLQ6UXV4 268 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 LRRC28Q86X40 367 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GPR135Q8IZ08 494 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 GPR150Q8NGU9 434 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
COL2A1-201ENST00000337299 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-201ENST00000337299 LINC00597Q9H2U6 94 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms