RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PGAP1Q75T13 922 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SGPP2Q8IWX5 399 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TOMM40LQ969M1 308 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF578Q96N58 590 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SLC6A16Q9GZN6 736 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 BCAS3Q9H6U6 928 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 DKKL1Q9UK85 242 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OSMP13725 252 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ACPPP15309 386 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PREPP48147 710 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MICAQ29983 383 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 AARDQ4LEZ3 155 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 LIPJQ5W064 366 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TRAM1L1Q8N609 369 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OR4E2Q8NGC2 313 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OR9Q2Q8NGE9 314 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OR1S1Q8NH92 325 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 UHRF1Q96T88 793 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 IL20RAQ9UHF4 553 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PADI3Q9ULW8 664 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 MEGF6O75095 1541 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 B4DGG1 531 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ANHXE9PGG2 379 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 RFXAPO00287 272 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 PMM2O15305 246 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 IL33O95760 270 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 GNSP15586 552 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TNFSF8P32971 234 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TPMTP51580 245 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 GALNT2Q10471 571 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 STK11Q15831 433 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 LEG1Q6P5S2 330 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SLC35F2Q8IXU6 374 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 TEX26Q8N6G2 289 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 IL17RDQ8NFM7 739 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 SLC7A13Q8TCU3 470 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 FOXRED1Q96CU9 486 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ST6GALNAC5Q9BVH7 336 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 THSD1Q9NS62 852 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 OARD1Q9Y530 152 aa9.34□□□□□ -0.91
COL4A6-201ENST00000334504 ARGFXA6NJG6 315 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SNNO75324 88 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GMPRP36959 345 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 FKBP1CQ5VVH2 108 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 NRROSQ86YC3 692 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OR51T1Q8NGJ9 327 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OR4K13Q8NH42 304 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 DENND1AQ8TEH3 1009 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SPRYD4Q8WW59 207 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ZBTB8AQ96BR9 441 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SGTBQ96EQ0 304 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 RANBP9Q96S59 729 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ALG8Q9BVK2 526 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SLC25A18Q9H1K4 315 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 NMNAT1Q9HAN9 279 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GCM1Q9NP62 436 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PUS1Q9Y606 427 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TSPAN11A1L157 253 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 DNAJB6O75190 326 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 NDUFS1P28331 727 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 FLT3LGP49771 235 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OPCMLQ14982 345 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 PDSS1Q5T2R2 415 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM107Q6UX40 140 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF546Q86UE3 836 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ANKK1Q8NFD2 765 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OR51D1Q8NGF3 324 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 KCNK12Q9HB15 430 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ACOT7O00154 380 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GSRP00390 522 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 RPL17P18621 184 aaKnown RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TIA1P31483 386 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SOX9P48436 509 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GPR143P51810 404 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ACY1Q03154 408 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SERINC3Q13530 473 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TP53I3Q53FA7 332 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 MAPK15Q8TD08 544 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ACOT11Q8WXI4 607 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TFGQ92734 400 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 OR2M2Q96R28 347 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 IL12RB2Q99665 862 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TESQ9UGI8 421 aaKnown RBP9.33□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM98Q9Y2Y6 226 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ESCO2Q56NI9 601 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 SLC22A25Q6T423 547 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 GDPGP1Q6ZNW5 385 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF808Q8N4W9 903 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms