RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SLC38A9Q8NBW4 561 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OR5T3Q8NGG3 340 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OR2Y1Q8NGV0 311 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OIT3Q8WWZ8 545 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 METTL21AQ8WXB1 218 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 CNRIP1Q96F85 164 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 RBM18Q96H35 190 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 PEX11GQ96HA9 241 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 PANX1Q96RD7 426 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 CPPED1Q9BRF8 314 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 PAIP1Q9H074 479 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 KAT8Q9H7Z6 458 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 USE1Q9NZ43 259 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 HCN3Q9P1Z3 774 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 FAF1Q9UNN5 650 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 SEC16AO15027 2179 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OR6C76A6NM76 312 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 EVPLLA8MZ36 301 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 GNGT2O14610 69 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 EMC8O43402 210 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 ASNA1O43681 348 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 PRKD3O94806 890 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 PTPN6P29350 595 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OR1D4P47884 311 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 IST1P53990 364 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 TPD52P55327 224 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 RPS15P62841 145 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 SLC13A2Q13183 592 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 ZNF385BQ569K4 471 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 RBM48Q5RL73 367 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 FAM198BQ6UWH4 519 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 CDC26Q8NHZ8 85 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 LZICQ8WZA0 190 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 DAZLQ92904 295 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 MR1Q95460 341 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 EXOSC8Q96B26 276 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 NEURL3Q96EH8 262 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 AURKBQ96GD4 344 aaPredicted RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 CSF3RQ99062 836 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 RBM4BQ9BQ04 359 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 RBM4Q9BWF3 364 aaKnown RBP8.87□□□□□ -0.99
C11orf54-201ENST00000331239 OSBPL10Q9BXB5 764 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 ALOXE3Q9BYJ1 711 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 GLIPR2Q9H4G4 154 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 MAGIXQ9H6Y5 334 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 KNTC1P50748 2209 aa8.87□□□□□ -0.99
C11orf54-201ENST00000331239 FER1L5A0AVI2 2057 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 A0A1W2PNU3 283 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ZNF860A6NHJ4 632 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 TERTO14746 1132 aaKnown RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 FGF17O60258 216 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 NTRK1P04629 796 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 HEXBP07686 556 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 SPTBP11277 2137 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 JUNBP17275 347 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 GPX2P18283 190 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 STAT5AP42229 794 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 NCBP2P52298 156 aaKnown RBP eCLIP8.86□□□□□ -0.992e-8■□□□□ 9.3
C11orf54-201ENST00000331239 SSPNQ14714 243 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 MPEG1Q2M385 716 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ZNF628Q5EBL2 1059 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 C3orf38Q5JPI3 329 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 CALHM3Q86XJ0 350 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 DTX1Q86Y01 620 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 CROCCP3Q8IVE0 287 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 EID3Q8N140 333 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 OR2L13Q8N349 312 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ZNF555Q8NEP9 628 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 OR4A15Q8NGL6 344 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 OR13F1Q8NGS4 319 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 OR8K3Q8NH51 312 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 HDAC2Q92769 488 aaKnown RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 HOXB13Q92826 284 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 FAM120BQ96EK7 910 aaKnown RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 DGAT2Q96PD7 388 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 MBOAT4Q96T53 435 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 SPSB2Q99619 263 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 SMURF2Q9HAU4 748 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 PLGRKTQ9HBL7 147 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ASCL3Q9NQ33 180 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 DCAF13Q9NV06 445 aaKnown RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 GALNT8Q9NY28 637 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 C19orf53Q9UNZ5 99 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 CLDN16Q9Y5I7 305 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 KIF26BQ2KJY2 2108 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 hCG_2014768A0A024R1R8 64 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 A0A1W2PPW3 197 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 TRIM64BA6NI03 449 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 DUXAA6NLW8 204 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 HYAL3O43820 417 aaPredicted RBP8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ALOX12BO75342 701 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 E2F6O75461 281 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 CREG1O75629 220 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 IL7RP16871 459 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 ITIH1P19827 911 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 CRHBPP24387 322 aa8.86□□□□□ -0.99
C11orf54-201ENST00000331239 LCN1P31025 176 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms