RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 COX18Q8N8Q8 333 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.33
CMTM1-201ENST00000328020 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 NXF5Q9H1B4 397 aaKnown RBP13.02□□□□□ -0.33
CMTM1-201ENST00000328020 LIN28AQ9H9Z2 209 aaKnown RBP13.02□□□□□ -0.33
CMTM1-201ENST00000328020 EFCAB1Q9HAE3 211 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 TPT1P8Q9HAU6 139 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 EXD2Q9NVH0 621 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 GPATCH2Q9NW75 528 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.02□□□□□ -0.33
CMTM1-201ENST00000328020 NPFFR2Q9Y5X5 522 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 ATMQ13315 3056 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
CMTM1-201ENST00000328020 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TRAV17A0A0B4J275 112 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 MRASO14807 208 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 ASNA1O43681 348 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 NKX2-2O95096 273 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 WDPCPO95876 746 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 AK1P00568 194 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CT45A8P0DMV1 189 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CT45A9P0DMV2 189 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 COX4I1P13073 169 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CD46P15529 392 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 ABCD3P28288 659 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 IL12BP29460 328 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CDKN2CP42773 168 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 GAB1Q13480 694 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 ART3Q13508 389 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TUBA3CQ13748 450 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 EFR3AQ14156 821 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 NNATQ16517 81 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TRMT5Q32P41 509 aaKnown RBP13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CT45A2Q5DJT8 189 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 FAM91A1Q658Y4 838 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TUBA3EQ6PEY2 450 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CYP4Z2PQ8N1L4 340 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 SIMC1Q8NDZ2 872 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 HOXB13Q92826 284 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-201ENST00000328020 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-201ENST00000328020 GIMAP5Q96F15 307 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 C5orf34Q96MH7 638 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 NPAS2Q99743 824 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 G6PC3Q9BUM1 346 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 BTBD2Q9BX70 525 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 PAIP1Q9H074 479 aaKnown RBP13.01□□□□□ -0.33
CMTM1-201ENST00000328020 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 PIGUQ9H490 435 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TRIM45Q9H8W5 580 aaPredicted RBP13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 LRFN1Q9P244 771 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 CBLCQ9ULV8 474 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 PCDHB14Q9Y5E9 798 aa13.01□□□□□ -0.33
CMTM1-201ENST00000328020 ASPDHA6ND91 283 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 CLIC1O00299 241 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 REM1O75628 298 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 PPM1BO75688 479 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 ATP6V1C1P21283 382 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 LCN1P31025 176 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 CD96P40200 585 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 SOX3P41225 446 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 CRATP43155 626 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 CORO7P57737 925 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
CMTM1-201ENST00000328020 PSG6Q00889 435 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 FADDQ13158 208 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 GNA13Q14344 377 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 OR1C1Q15619 314 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 PAGE3Q5JUK9 113 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 REP15Q6BDI9 236 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 IL20RBQ6UXL0 311 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 C16orf47Q6ZP98 133 aaPredicted RBP13□□□□□ -0.33
CMTM1-201ENST00000328020 RTL4Q6ZR62 310 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 NUP54Q7Z3B4 507 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 C16orf62Q7Z3J2 963 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 AMER2Q8N7J2 671 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 SLC16A11Q8NCK7 471 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 FAM13CQ8NE31 585 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 ZFP90Q8TF47 636 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 TMCO6Q96DC7 493 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 OMA1Q96E52 524 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 C16orf58Q96GQ5 468 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 COL21A1Q96P44 957 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 OR7D2Q96RA2 312 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 SECISBP2Q96T21 854 aaKnown RBP13□□□□□ -0.33
CMTM1-201ENST00000328020 YIPF4Q9BSR8 244 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 TRIM4Q9C037 500 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 HHATLQ9HCP6 504 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 LIPT1Q9Y234 373 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 AP3M1Q9Y2T2 418 aa13□□□□□ -0.33
CMTM1-201ENST00000328020 IGSF10Q6WRI0 2623 aa12.99□□□□□ -0.33
CMTM1-201ENST00000328020 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
CMTM1-201ENST00000328020 ATRXP46100 2492 aa12.99□□□□□ -0.33
CMTM1-201ENST00000328020 C15orf38-AP3S2A0A0A6YYH1 394 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms