RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	CSTF1	Q05048	431 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NFATC4	Q14934	902 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	QPRT	Q15274	297 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NKG7	Q16617	165 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GGTA1P	Q4G0N0	100 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	AVL9	Q8NBF6	648 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	PROKR2	Q8NFJ6	384 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ADAMTS16	Q8TE57	1224 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	COQ8B	Q96D53	544 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	STMN3	Q9NZ72	180 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OR6C2	Q9NZP2	312 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	FBXO9	Q9UK97	447 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ERVK-11	Q9UQG0	969 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CEPT1	Q9Y6K0	416 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	PTPRF	P10586	1907 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	FAAH	O00519	579 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	NRG2	O14511	850 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	KIAA0513	O60268	411 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	ENTPD6	O75354	484 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	CCNK	O75909	580 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	PYCR1	P32322	319 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	PPP2R2B	Q00005	443 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	PIP5KL1	Q5T9C9	394 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	FRMPD2B	Q6IN97	320 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	ZNF544	Q6NX49	715 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	TMEM179B	Q7Z7N9	219 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	SLC15A4	Q8N697	577 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	OR8J1	Q8NGP2	316 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	TSEN15	Q8WW01	171 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	MRGPRX3	Q96LB0	322 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	TRNT1	Q96Q11	434 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	BEX2	Q9BXY8	128 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	RACGAP1	Q9H0H5	632 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	BEX1	Q9HBH7	125 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	SERTAD3	Q9UJW9	196 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	TMPRSS11E	Q9UL52	423 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	TDRD6	O60522	2096 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	ZNF638	Q14966	1978 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771		A8MV72	311 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	EIF1AY	O14602	144 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	KLHL18	O94889	574 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	GAST	P01350	101 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	HNRNPA0	Q13151	305 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	SMU1	Q2TAY7	513 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	CMPK2	Q5EBM0	449 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	PODNL1	Q6PEZ8	512 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771		Q6ZS52	159 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	KLB	Q86Z14	1044 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	SLC7A5P1	Q8MH63	180 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	KLHL36	Q8N4N3	616 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	SLC16A11	Q8NCK7	471 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	OR10H5	Q8NGA6	315 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	AP3S1	Q92572	193 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	EFHD2	Q96C19	240 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	COQ10A	Q96MF6	247 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	KCTD7	Q96MP8	289 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	CDCA3	Q99618	268 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	RHNO1	Q9BSD3	238 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	EXO5	Q9H790	373 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	MRPL39	Q9NYK5	338 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	STOML2	Q9UJZ1	356 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	ERVK-19	Q9WJR5	959 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	WBP11	Q9Y2W2	641 aa	Known RBP	11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	PEX16	Q9Y5Y5	336 aa		11.15	□□□□□ -0.62
DDR1-223	ENST00000324771	RCBTB2	O95199	551 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	PLG	P00747	810 aa	Predicted RBP	11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	MVK	Q03426	396 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	ARHGAP19	Q14CB8	494 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	PYCR3	Q53H96	274 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	FBXL6	Q8N531	539 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	SCAI	Q8N9R8	606 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	THEM6	Q8WUY1	208 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	TTYH2	Q9BSA4	534 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	AMBRA1	Q9C0C7	1298 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	LIPT1	Q9Y234	373 aa		11.15	□□□□□ -0.63
DDR1-223	ENST00000324771	SCN2A	Q99250	2005 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CD8B2	A6NJW9	211 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	ARHGEF15	O94989	841 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CD8B	P10966	210 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	GPX2	P18283	190 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CCKBR	P32239	447 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	OR12D2	P58182	307 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CDKN3	Q16667	212 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	IKBIP	Q70UQ0	350 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	B3GNT8	Q7Z7M8	397 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	PTRH1	Q86Y79	214 aa	Known RBP	11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CPO	Q8IVL8	374 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	B3GNT7	Q8NFL0	401 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	TM9SF2	Q99805	663 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	C1QTNF3	Q9BXJ4	246 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	ZNF385D	Q9H6B1	395 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	ERVK13-1	Q9NX77	482 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	ZNF222	Q9UK12	451 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	SLC7A7	Q9UM01	511 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CFL2	Q9Y281	166 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	CENPF	P49454	3210 aa		11.14	□□□□□ -0.63
DDR1-223	ENST00000324771	ABCA7	Q8IZY2	2146 aa		11.14	□□□□□ -0.63

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