RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 USP22Q9UPT9 525 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 TESMINQ9Y4I5 508 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 WDFY4Q6ZS81 3184 aa11.93□□□□□ -0.5
DDX39A-202ENST00000324340 ASCC3Q8N3C0 2202 aaKnown RBP11.93□□□□□ -0.5
DDX39A-202ENST00000324340 IGLV3-12A0A075B6K2 115 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DHRS12A0PJE2 317 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ELOVL7A1L3X0 281 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 B4E171 279 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ARPC2O15144 300 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 NDUFB5O43674 189 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DYRK3O43781 588 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MRPS14O60783 128 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 B4GALT2O60909 372 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 UGT2B11O75310 529 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TNFRSF21O75509 655 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SCRG1O75711 98 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DKK1O94907 266 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TIAF1O95411 115 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 HPRP00739 348 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SLC35E2P0CK97 266 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ITIH1P19827 911 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 M6PRP20645 277 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 GPC1P35052 558 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 RORAP35398 523 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 IDUAP35475 653 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SOAT1P35610 550 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SOX18P35713 384 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TSPAN7P41732 249 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 XCR1P46094 333 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CCT3P49368 545 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 LIMK1P53667 647 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 BIKQ13323 160 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DGUOKQ16854 277 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF628Q5EBL2 1059 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TBCELQ5QJ74 424 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CCNJQ5T5M9 372 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF385CQ66K41 422 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ERICH5Q6P6B1 374 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 BHLHB9Q6PI77 547 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR4N5Q8IXE1 308 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZZZ3Q8IYH5 903 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SLC7A5P1Q8MH63 180 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SLC38A9Q8NBW4 561 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 C7orf57Q8NEG2 295 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR52E4Q8NGH9 312 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR5AK3PQ8NH89 298 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF675Q8TD23 568 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TRIM63Q969Q1 353 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ELP4Q96EB1 424 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OSBPL10Q9BXB5 764 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 GORASP2Q9H8Y8 452 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 DIABLOQ9NR28 239 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PRTFDC1Q9NRG1 225 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 NDOR1Q9UHB4 597 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 EGFL7Q9UHF1 273 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MMACHCQ9Y4U1 282 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 PCDHGB1Q9Y5G3 927 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 SNX8Q9Y5X2 465 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MAU2Q9Y6X3 613 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 A3GALT2U3KPV4 340 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CACNA1HO95180 2353 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 A0A087WV62 115 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 NOTOA8MTQ0 251 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TGFBR3LH3BV60 316 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TAF4O00268 1085 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 EMC8O43402 210 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ASNA1O43681 348 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 HOXB6P17509 224 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 NAT1P18440 290 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MATN1P21941 496 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 GALNSP34059 522 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CHI3L1P36222 383 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 C19orf57Q0VDD7 668 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 VEZF1Q14119 521 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TRIP6Q15654 476 aaKnown RBP11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF181Q2M3W8 571 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 VMACQ2NL98 169 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CYBRD1Q53TN4 286 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 COX20Q5RI15 118 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 FHL5Q5TD97 284 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 TMEM107Q6UX40 140 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 QSOX2Q6ZRP7 698 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 COX15Q7KZN9 410 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 C6orf120Q7Z4R8 191 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 RNF130Q86XS8 419 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 EPHX4Q8IUS5 362 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR2L13Q8N349 312 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 MFSD4AQ8N468 514 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 OR56A1Q8NGH5 318 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 COL26A1Q96A83 441 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
DDX39A-202ENST00000324340 CTHRC1Q96CG8 243 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms