RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC14A2Q15849 920 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 LRRC37A5PQ49AS3 106 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 PLAG1Q6DJT9 500 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 FAM180AQ6UWF9 173 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 UBQLNLQ8IYU4 475 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 CYB561A3Q8NBI2 242 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 TMPRSS11EQ9UL52 423 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 AKAP8O43823 692 aaKnown RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 GATBO75879 557 aaKnown RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 PROS1P07225 676 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 CXCR4P61073 352 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 DUS3LQ96G46 650 aaKnown RBP14.44□□□□□ -0.1
VARS2-201ENST00000321897 CLDND1Q9NY35 253 aa14.44□□□□□ -0.1
VARS2-201ENST00000321897 J3QLW9 94 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SLC16A6O15403 523 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 CHST10O43529 356 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 PDGFAP04085 211 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ZNF19P17023 458 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 GNA13Q14344 377 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 BAK1Q16611 211 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 FAM209AQ5JX71 171 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ASTLQ6HA08 431 aaPredicted RBP14.43□□□□□ -0.1
VARS2-201ENST00000321897 LYPD8Q6UX82 237 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 USP51Q70EK9 711 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 PDZD3Q86UT5 571 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 COQ10AQ96MF6 247 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SECISBP2Q96T21 854 aaKnown RBP14.43□□□□□ -0.1
VARS2-201ENST00000321897 KCNN2Q9H2S1 579 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 DUSP21Q9H596 190 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 GLTPQ9NZD2 209 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 PLEKHM1Q9Y4G2 1056 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 TEX13CA0A0J9YWL9 993 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 EFCAB14O75071 495 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 REM1O75628 298 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 OR6A2O95222 327 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 HTR1AP08908 422 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 CD3GP09693 182 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 CERS1P27544 350 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 TIAL1Q01085 375 aaKnown RBP eCLIP14.43□□□□□ -0.1
VARS2-201ENST00000321897 SIGIRRQ6IA17 410 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 GRHL2Q6ISB3 625 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ZNF683Q8IZ20 524 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 C10orf111Q8N326 155 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SYT14Q8NB59 555 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 C1orf216Q8TAB5 229 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SNX33Q8WV41 574 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 FAM46AQ96IP4 442 aaKnown RBP14.43□□□□□ -0.1
VARS2-201ENST00000321897 ARL6Q9H0F7 186 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SLC35C2Q9NQQ7 365 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 TNFRSF10DQ9UBN6 386 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 PSORS1C1Q9UIG5 152 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 COLEC10Q9Y6Z7 277 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ZDHHC11BP0C7U3 371 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 AHCYP23526 432 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 GRPRP30550 384 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ACVR1BP36896 505 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 PXNP49023 591 aaPredicted RBP14.43□□□□□ -0.1
VARS2-201ENST00000321897 CFAP77Q6ZQR2 320 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 UBE2Q1Q7Z7E8 422 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 LSRQ86X29 649 aaPredicted RBP14.43□□□□□ -0.1
VARS2-201ENST00000321897 LACC1Q8IV20 430 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 ZNF563Q8TA94 476 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SAP130Q9H0E3 1048 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 DMRT3Q9NQL9 472 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 SVILO95425 2214 aa14.43□□□□□ -0.1
VARS2-201ENST00000321897 FAM86C2PA6NEL3 165 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 ABLIM3O94929 683 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 TAP2Q03519 686 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 IRF5Q13568 498 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 ARSKQ6UWY0 536 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 GALNT7Q86SF2 657 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 KLHDC8AQ8IYD2 350 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 KLHL36Q8N4N3 616 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 PLA2G15Q8NCC3 412 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 RAD9AQ99638 391 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 TEX10Q9NXF1 929 aaPredicted RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 CSNK1G3Q9Y6M4 447 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 A0A1B0GVT2 93 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 C1orf105O95561 183 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 PVRP15151 417 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 KHKP50053 298 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 DUSP7Q16829 419 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 HYAL4Q2M3T9 481 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 FAM26DQ5JW98 314 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 ALG1LQ6GMV1 187 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 XKRXQ6PP77 449 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 CBARPQ8N350 705 aaPredicted RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 DENND6BQ8NEG7 585 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 TRIM43Q96BQ3 446 aaPredicted RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 PDLIM5Q96HC4 596 aaKnown RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 IL21RQ9HBE5 538 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 SNX11Q9Y5W9 270 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 WNK3Q9BYP7 1800 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 ZFC3H1O60293 1989 aaKnown RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 PSMD9O00233 223 aa14.42□□□□□ -0.1
VARS2-201ENST00000321897 HMGN2P05204 90 aaKnown RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 STXBP1P61764 594 aaKnown RBP14.42□□□□□ -0.1
VARS2-201ENST00000321897 PPP3R1P63098 170 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms