RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ZNF107Q9UII5 783 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RNF11Q9Y3C5 154 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NOX1Q9Y5S8 564 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 D6RAR5 112 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SCAMP3O14828 347 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 EEF1E1O43324 174 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 OR6A2O95222 327 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PCSK6P29122 969 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ETV5P41161 510 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 LIMK1P53667 647 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ARPP19P56211 112 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 COTL1Q14019 142 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CPSF6Q16630 551 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 UGCGQ16739 394 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 Q3ZCU0 254 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 APOBEC3HQ6NTF7 200 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PRICKLE2Q7Z3G6 844 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RDH10Q8IZV5 341 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.3□□□□□ -1.726e-7■■■■■ 39.7
CNOT1-201ENST00000317147 TSEN15Q8WW01 171 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 OVCA2Q8WZ82 227 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 IMP4Q96G21 291 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SLC35G5Q96KT7 338 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NPY6RQ99463 290 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ABCG4Q9H172 646 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM248Q9NWD8 314 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MYEF2Q9P2K5 600 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CACFD1Q9UGQ2 172 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NOP16Q9Y3C1 178 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SPO11Q9Y5K1 396 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 A0A1W2PRQ8 180 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 YDJCA8MPS7 323 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 HSBP1L1C9JCN9 74 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TSPAN15O95858 294 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 F7P08709 466 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 FGF9P31371 208 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NDUFV1P49821 464 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DUSP4Q13115 394 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ABCA11PQ4W5N1 156 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 LIPKQ5VXJ0 399 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MFSD14CQ5VZR4 134 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 FRRS1Q6ZNA5 592 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ADAMTS15Q8TE58 950 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CORO2AQ92828 525 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 BTBD2Q9BX70 525 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 APMAPQ9HDC9 416 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 hCG_2039718K7EN88 272 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 AHSGP02765 367 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 INHAP05111 366 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GAAP10253 952 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DRD2P14416 443 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OXTRP30559 389 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ISL1P61371 349 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 IRF9Q00978 393 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FAM214AQ32MH5 1076 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ELFN2Q5R3F8 820 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC51AQ86UW1 340 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TEX26Q8N6G2 289 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GPRC5AQ8NFJ5 357 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR6J1Q8NGC5 347 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR5M3Q8NGP4 307 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OLIG1Q8TAK6 271 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FCRL2Q96LA5 508 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CCNL2Q96S94 520 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TXN2Q99757 166 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RBCK1Q9BYM8 510 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FZD8Q9H461 694 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 KCNJ16Q9NPI9 418 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TIGARQ9NQ88 270 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 USP21Q9UK80 565 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 NBEAL1Q6ZS30 2694 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ELOA3CA0A087WX78 387 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CXorf51AA0A1B0GTR3 108 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 UNCXA6NJT0 531 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SSX4O60224 188 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 B3GAT3O94766 335 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RENP00797 406 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 G6PDP11413 515 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TNFSF8P32971 234 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 WDR5P61964 334 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF460Q14592 562 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 YIF1BQ5BJH7 314 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 AADACL4Q5VUY2 407 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ABLIM2Q6H8Q1 611 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 KCTD18Q6PI47 426 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMUB2Q71RG4 321 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OTOP3Q7RTS5 596 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MTMR14Q8NCE2 650 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FRS2Q8WU20 508 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MARC2Q969Z3 335 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC22A18Q96BI1 424 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 C12orf57Q99622 126 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TNKS2Q9H2K2 1166 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CRTAC1Q9NQ79 661 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms