RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OGG1O15527 345 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SEC24DO94855 1032 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 RPLP0P05388 317 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 PPIBP23284 216 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 GABRA5P31644 462 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 NHLH1Q02575 133 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 PGS1Q32NB8 556 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 FAM122BQ7Z309 247 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 IFNEQ86WN2 208 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 WDR36Q8NI36 951 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ERLEC1Q96DZ1 483 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 MTERF1Q99551 399 aaKnown RBP7.3□□□□□ -1.24
CNOT4-201ENST00000315544 SLC35A5Q9BS91 424 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF350Q9GZX5 532 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 KRT84Q9NSB2 600 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 FBXL3Q9UKT7 428 aa7.3□□□□□ -1.24
CNOT4-201ENST00000315544 RNF103-CHMP3A0A140T963 221 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KPNA4O00629 521 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 PFDN6O15212 129 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 PDE9AO76083 593 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CEACAM5P06731 702 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 IL3P08700 152 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CYP2A6P11509 494 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CYP4B1P13584 511 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 GTF2E2P29084 291 aaKnown RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 BCL6P41182 706 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 GPR19Q15760 415 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 TRIM61Q5EBN2 209 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 LINC01590Q5TEZ4 76 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ERAP2Q6P179 960 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FAM111BQ6SJ93 734 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 RASSF6Q6ZTQ3 369 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 PAQR7Q86WK9 346 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FAM9CQ8IZT9 166 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SYT14Q8NB59 555 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ANGPTL6Q8NI99 470 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 THAP4Q8WY91 577 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 RSPH9Q9H1X1 276 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 EXOSC3Q9NQT5 275 aaKnown RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 APOBEC3BQ9UH17 382 aaKnown RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KPNA5O15131 536 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 NADKO95544 446 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 MELTFP08582 738 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 NID1P14543 1247 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CD53P19397 219 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 RPS25P62851 125 aaKnown RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 TEAD2Q15562 447 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ARMCX4Q5H9R4 360 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FCRL6Q6DN72 434 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FAM199XQ6PEV8 388 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CCBE1Q6UXH8 406 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SYT13Q7L8C5 426 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 NUP54Q7Z3B4 507 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 GRASPQ7Z6J2 395 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 C17orf82Q86X59 251 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SLC7A5P1Q8MH63 180 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 DTWD2Q8NBA8 298 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM52Q8NDY8 209 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FLCNQ8NFG4 579 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 OR9A1PQ8NGU1 263 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ZFAND1Q8TCF1 268 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SELENOMQ8WWX9 145 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM19Q96HH6 336 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ADGRL4Q9HBW9 690 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 PCDHGA9Q9Y5G4 932 aaKnown RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 GMPPBQ9Y5P6 360 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 LINC00862A6NCI5 91 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FAAHO00519 579 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 PIN1P1O15428 100 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CYP7B1O75881 506 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KRT6AP02538 564 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KRT6BP04259 564 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 H2AFB1P0C5Y9 115 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 H2AFB2P0C5Z0 115 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ITGALP20701 1170 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FPR3P25089 353 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 AVPR2P30518 371 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 P2RY2P41231 377 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 NR4A2P43354 598 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KRT6CP48668 564 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ITKQ08881 620 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 METAP1DQ6UB28 335 aaPredicted RBP7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF620Q6ZNG0 422 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SSX6Q7RTT6 188 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FAM46DQ8NEK8 389 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 ASB12Q8WXK4 309 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 SORCS1Q8WY21 1168 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 OR5P2Q8WZ92 322 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 FOLH1BQ9HBA9 442 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 CHRNA9Q9UGM1 479 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 KLHL21Q9UJP4 597 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 TPRKBQ9Y3C4 175 aa7.29□□□□□ -1.24
CNOT4-201ENST00000315544 DMXL1Q9Y485 3027 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 BOD1L1Q8NFC6 3051 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 EIF4E2O60573 245 aaKnown RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ANKRD34CP0C6C1 535 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms