RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 FAAH2Q6GMR7 532 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 TEX261Q6UWH6 196 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 MRGPREQ86SM8 312 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 ZNF547Q8IVP9 402 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 ZNF680Q8NEM1 530 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 OR4F15Q8NGB8 312 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 NEIL3Q8TAT5 605 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 AKAP1Q92667 903 aaKnown RBP eCLIP12.65□□□□□ -0.39
SKA3-202ENST00000314759 PHF21AQ96BD5 680 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 ZDHHC5Q9C0B5 715 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.39
SKA3-202ENST00000314759 SLC9A8Q9Y2E8 581 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 U3KQ87 197 aa12.65□□□□□ -0.39
SKA3-202ENST00000314759 KIF26AQ9ULI4 1882 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 A0A087WUU8 490 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 A0A0A6YYJ9 748 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 SNTNA6NMZ2 147 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 NTN1O95631 604 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 CELP19835 753 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 ZNF155Q12901 538 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 RIN1Q13671 783 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 CLEC12AQ5QGZ9 265 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 ZNF57Q68EA5 555 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 WASH2PQ6VEQ5 465 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 DEFB128Q7Z7B8 93 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 LINC00471Q8N535 108 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 ZNF366Q8N895 744 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 OR11H4Q8NGC9 324 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TEX47Q8TBZ9 253 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 PRRC1Q96M27 445 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 MS4A8Q9BY19 250 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 RNF32Q9H0A6 362 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 SLC28A3Q9HAS3 691 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 C12orf10Q9HB07 376 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TRPC4Q9UBN4 977 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 IL36AQ9UHA7 158 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 DENND4CQ5VZ89 1909 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TEX51A0A1B0GUA7 166 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 C2orf92A0A1B0GVN3 265 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 KDM4EB2RXH2 506 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 SGK494L7N484 410 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 GABRPO00591 440 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 RFPL3O75679 317 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TYRP14679 529 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 GSTM3P21266 225 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 PTBP1P26599 531 aaKnown RBP eCLIP12.64□□□□□ -0.39
SKA3-202ENST00000314759 PTGS2P35354 604 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 B3GLCTQ6Y288 498 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TMCO2Q7Z6W1 182 aaPredicted RBP12.64□□□□□ -0.39
SKA3-202ENST00000314759 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 MRGPRX3Q96LB0 322 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 GPR137Q96N19 417 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 NUP50Q9UKX7 468 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 MGAT4AQ9UM21 535 aa12.64□□□□□ -0.39
SKA3-202ENST00000314759 TRIM77I1YAP6 450 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 DVL2O14641 736 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 UBXN7O94888 489 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 RB1P06400 928 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 SYN1P17600 705 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 BUD31P41223 144 aaPredicted RBP12.63□□□□□ -0.39
SKA3-202ENST00000314759 INPP1P49441 399 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 LCTLQ6UWM7 567 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 PRICKLE2Q7Z3G6 844 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 AMER3Q8N944 861 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 OR5AR1Q8NGP9 310 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 ZNF431Q8TF32 576 aaPredicted RBP12.63□□□□□ -0.39
SKA3-202ENST00000314759 SLC35G5Q96KT7 338 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 ZNF649Q9BS31 505 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 RHBGQ9H310 441 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
SKA3-202ENST00000314759 UCKL1Q9NWZ5 548 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CNIH4Q9P003 139 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 ASF1AQ9Y294 204 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CD8B2A6NJW9 211 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CHP2O43745 196 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 LANCL1O43813 399 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
SKA3-202ENST00000314759 HLA-DPB1P04440 258 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CHRM4P08173 479 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CD8BP10966 210 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 PTGER1P34995 402 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 GPR162Q16538 588 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 VASNQ6EMK4 673 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 ASB18Q6ZVZ8 466 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 POGLUT1Q8NBL1 392 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 YIPF4Q9BSR8 244 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
SKA3-202ENST00000314759 C11orf49Q9H6J7 331 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms