RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RAB42Q8N4Z0 105 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 ANKRD53Q8N9V6 530 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 DNAJA4Q8WW22 397 aaPredicted RBP13.02□□□□□ -0.33
MKS1-201ENST00000313863 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
MKS1-201ENST00000313863 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 UBL7Q96S82 380 aaPredicted RBP13.02□□□□□ -0.33
MKS1-201ENST00000313863 GPA33Q99795 319 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 TMED9Q9BVK6 235 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 ACAT2Q9BWD1 397 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 PLA2G12AQ9BZM1 189 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 GLIPR2Q9H4G4 154 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 B3GAT2Q9NPZ5 323 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 SLC35C2Q9NQQ7 365 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 MCUBQ9NWR8 336 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 H2AFY2Q9P0M6 372 aaPredicted RBP13.02□□□□□ -0.33
MKS1-201ENST00000313863 MALT1Q9UDY8 824 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 CBLCQ9ULV8 474 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 SATB2Q9UPW6 733 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 LIPT1Q9Y234 373 aa13.02□□□□□ -0.33
MKS1-201ENST00000313863 A0A087WUU8 490 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 LILRB3O75022 631 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 APOL3O95236 402 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 PAPLNO95428 1278 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 CRYZL1O95825 349 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TBX6O95947 436 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 IGHA1P01876 353 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 INHAP05111 366 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 OR3A3P47888 321 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 AVPR1BP47901 424 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 MTNR1BP49286 362 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
MKS1-201ENST00000313863 TAS2R38P59533 333 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 GPLD1P80108 840 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 P2RY14Q15391 338 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 POM121L1PQ3SYA9 428 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 LY6G5CQ5SRR4 150 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 OR4C11Q6IEV9 310 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 CNKSR3Q6P9H4 555 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 ZNF782Q6ZMW2 699 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 LHFPL3Q86UP9 236 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TTLQ8NG68 377 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 OR5D16Q8NGK9 328 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 OR5AR1Q8NGP9 310 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 WFIKKN2Q8TEU8 576 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 UPRTQ96BW1 309 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 MKRN2Q9H000 416 aaKnown RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 KRCC1Q9NPI7 259 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 TDP1Q9NUW8 608 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 PTTG3PQ9NZH4 202 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 C5AR2Q9P296 337 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 ITM2BQ9Y287 266 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 CDH10Q9Y6N8 788 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 WASHC1A8K0Z3 465 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TMPRSS11DO60235 418 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 LZTS3O60299 673 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 PQBP1O60828 265 aaKnown RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 CLEC3AO75596 197 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 RGS9O75916 674 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 CELP19835 753 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 FPR3P25089 353 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 HTR1FP30939 366 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 RNF144AP50876 292 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 CAV3P56539 151 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 AADACL4Q5VUY2 407 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 CDC73Q6P1J9 531 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TRILQ7L0X0 811 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 GET4Q7L5D6 327 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 LRRC28Q86X40 367 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 ZNF547Q8IVP9 402 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TOR1AIP2Q8NFQ8 470 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TFGQ92734 400 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 ARHGDIGQ99819 225 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
MKS1-201ENST00000313863 B3GNT2Q9NY97 397 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 TEKT2Q9UIF3 430 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 PLAGL1Q9UM63 463 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 GPR52Q9Y2T5 361 aa13.01□□□□□ -0.33
MKS1-201ENST00000313863 SURF4O15260 269 aa13□□□□□ -0.33
MKS1-201ENST00000313863 DHFRP00374 187 aa13□□□□□ -0.33
MKS1-201ENST00000313863 CHRM4P08173 479 aa13□□□□□ -0.33
MKS1-201ENST00000313863 HK1P19367 917 aa13□□□□□ -0.33
MKS1-201ENST00000313863 SSR2P43308 183 aa13□□□□□ -0.33
MKS1-201ENST00000313863 TRAM1Q15629 374 aa13□□□□□ -0.33
MKS1-201ENST00000313863 DECR1Q16698 335 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ZNF311Q5JNZ3 666 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms