RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR5D16Q8NGK9 328 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 LRRC8CQ8TDW0 803 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DYDC1Q8WWB3 177 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 COQ8BQ96D53 544 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 MAELQ96JY0 434 aaKnown RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 RILPQ96NA2 401 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 INPP5KQ9BT40 448 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 TIMMDC1Q9NPL8 285 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 AIG1Q9NVV5 245 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SEC14L3Q9UDX4 400 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 EIF3LQ9Y262 564 aaKnown RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 KLF13Q9Y2Y9 288 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 GPR45Q9Y5Y3 372 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 HECTD1Q9ULT8 2610 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 NPIPA5A0A0B4J1W7 369 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 E9PBE3 544 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 NPIPA7E9PJI5 369 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PLOD2O00469 737 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 LRRTM2O43300 516 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 GSNP06396 782 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 NPIPA8P0DM63 369 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 PRPS2P11908 318 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 ENDOUP21128 410 aaKnown RBP11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DRD5P21918 477 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 GABRA3P34903 492 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 TRPC1P48995 793 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 IDH3AP50213 366 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DUSP5Q16690 384 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 FAM174BQ3ZCQ3 159 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 FIGNL1Q6PIW4 674 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 APOOLQ6UXV4 268 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 FJX1Q86VR8 437 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 HORMAD2Q8N7B1 307 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 ST6GALNAC3Q8NDV1 305 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DNAJB8Q8NHS0 232 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SPPL2AQ8TCT8 520 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 CKAP2Q8WWK9 683 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SLC9A6Q92581 669 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 RELTQ969Z4 430 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 TP53INP1Q96A56 240 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DOHHQ9BU89 302 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DUSP26Q9BV47 211 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 SACM1LQ9NTJ5 587 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 DNAJC13O75165 2243 aa11.04□□□□□ -0.64
SCFD1-201ENST00000311943 MYO7BQ6PIF6 2116 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 LRRK2Q5S007 2527 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 A1L4Q6 167 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 KDM4EB2RXH2 506 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 KLF11O14901 512 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 TFECO14948 347 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 CFLARO15519 480 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 TSPAN2O60636 221 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 PPM1BO75688 479 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 CPSF4O95639 269 aaKnown RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 P04436 131 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 HMGN2P05204 90 aaKnown RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 EDN3P14138 238 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 ASMTP46597 345 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 GUCY1A3Q02108 690 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 PLGLB1Q02325 96 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 LASP1Q14847 261 aaKnown RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 C3AR1Q16581 482 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 RMND5BQ96G75 393 aaPredicted RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 GPR137Q96N19 417 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 BTBD9Q96Q07 612 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 DPY30Q9C005 99 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 ZCCHC3Q9NUD5 404 aaKnown RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.03□□□□□ -0.645e-6■■■■□ 22.2
SCFD1-201ENST00000311943 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 MAPRE3Q9UPY8 281 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 PCDHGB6Q9Y5F9 930 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.03□□□□□ -0.64
SCFD1-201ENST00000311943 GTF3C1Q12789 2109 aa11.03□□□□□ -0.64
SCFD1-201ENST00000311943 FRG2CA6NGY1 282 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 KLRC4-KLRK1H3BQV0 150 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 TBX19O60806 448 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 ICOSLGO75144 302 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GLSO94925 669 aaPredicted RBP11.02□□□□□ -0.64
SCFD1-201ENST00000311943 CYP4B1P13584 511 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 PRPS1L1P21108 318 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 HPCAL1P37235 193 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GSTM5P46439 218 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GYS2P54840 703 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 AQP5P55064 265 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GTDC1Q4AE62 458 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 CGB2Q6NT52 195 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 TAGAPQ8N103 731 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GATSQ8NAP1 163 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 GOLM1Q8NBJ4 401 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 JADE3Q92613 823 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 ZBED6CLQ96FA7 236 aaPredicted RBP11.02□□□□□ -0.64
SCFD1-201ENST00000311943 C7orf26Q96N11 449 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 SLC6A15Q9H2J7 730 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 DCTN4Q9UJW0 460 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 FBXL2Q9UKC9 423 aa11.02□□□□□ -0.64
SCFD1-201ENST00000311943 DIDO1Q9BTC0 2240 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms