RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MTFR2Q6P444 385 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 TRIM40Q6P9F5 258 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 RRM2BQ7LG56 351 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 LRRC70Q7Z2Q7 622 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 CLRN3Q8NCR9 226 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 WDR48Q8TAF3 677 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 SEC22CQ9BRL7 303 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 ARHGAP9Q9BRR9 750 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.31
SPSB4-201ENST00000310546 CYSLTR2Q9NS75 346 aa17.02■□□□□ 0.31
SPSB4-201ENST00000310546 TMEM129A0AVI4 362 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 F5H5T6 163 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 G3V3Q6 166 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 GMDSO60547 372 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 SEMA7AO75326 666 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 GALTP07902 379 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 H2AFB2P0C5Z0 115 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 MPEG1Q2M385 716 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 MEX3DQ86XN8 651 aaKnown RBP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 OR52N2Q8NGI0 321 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 OR5M3Q8NGP4 307 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 TMEM168Q9H0V1 697 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 MARCH5Q9NX47 278 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 COPZ2Q9P299 210 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 A8MXK9 166 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 GATBO75879 557 aaKnown RBP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 LIMS3P0CW19 117 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 LIMS4P0CW20 117 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 CD22P20273 847 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 TACR2P21452 398 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 GPR17Q13304 367 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 DSG2Q14126 1118 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 FAM180BQ6P0A1 224 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 PGBD2Q6P3X8 592 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 FAM198BQ6UWH4 519 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 SIAH3Q8IW03 269 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 ARIH2OSQ8N7S6 290 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 IL17RCQ8NAC3 791 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 SLC5A11Q8WWX8 675 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 ZFP3Q96NJ6 502 aa17.01■□□□□ 0.31
SPSB4-201ENST00000310546 WRAP53Q9BUR4 548 aaKnown RBP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 TP53BP1Q12888 1972 aaPredicted RBP17.01■□□□□ 0.31
SPSB4-201ENST00000310546 COL4A4P53420 1690 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 LDOC1O95751 146 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 ACSL1P33121 698 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 MTNR1AP48039 350 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 DGKGP49619 791 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 ARHGDIBP52566 201 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 DEFB103AP81534 67 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 C6orf132Q5T0Z8 1188 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 FUT10Q6P4F1 479 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 LRRC28Q86X40 367 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 SLC7A13Q8TCU3 470 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 PELOQ9BRX2 385 aaKnown RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 POLDIP3Q9BY77 421 aaKnown RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 SCML2Q9UQR0 700 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 L7N2F9 121 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 NME6O75414 186 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 MT-ND4P03905 459 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 JUPP14923 745 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 OR1D2P34982 312 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 MAZP56270 477 aaKnown RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 LSM11P83369 360 aaKnown RBP eCLIP17■□□□□ 0.31
SPSB4-201ENST00000310546 DOC2AQ14183 400 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 ZNF791Q3KP31 576 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 SLC36A2Q495M3 483 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 OR6K2Q8NGY2 324 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 RPLP0P6Q8NHW5 317 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 DPH7Q9BTV6 452 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 ZCCHC4Q9H5U6 513 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 DNAJC11Q9NVH1 559 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 KCND3Q9UK17 655 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 ANGPT4Q9Y264 503 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 PCDHGA9Q9Y5G4 932 aaKnown RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
SPSB4-201ENST00000310546 RNF215Q9Y6U7 377 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 CHURC1-FNTBB4DL54 471 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 OAZ2O95190 189 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 HSD3B1P14060 373 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 GIPRP48546 466 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 TCTN3Q6NUS6 607 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 OXR1Q8N573 874 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 ADAMTS19Q8TE59 1207 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 ADAMTS14Q8WXS8 1223 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 MAGEH1Q9H213 219 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 IL26Q9NPH9 171 aa17■□□□□ 0.31
SPSB4-201ENST00000310546 GAPDHSO14556 408 aaPredicted RBP16.99■□□□□ 0.31
SPSB4-201ENST00000310546 H1F0P07305 194 aaKnown RBP16.99■□□□□ 0.31
SPSB4-201ENST00000310546 ACP2P11117 423 aa16.99■□□□□ 0.31
SPSB4-201ENST00000310546 CXCL2P19875 107 aa16.99■□□□□ 0.31
SPSB4-201ENST00000310546 RPS26P62854 115 aaKnown RBP16.99■□□□□ 0.31
SPSB4-201ENST00000310546 RAE1P78406 368 aaKnown RBP16.99■□□□□ 0.31
SPSB4-201ENST00000310546 DEFA5Q01523 94 aa16.99■□□□□ 0.31
SPSB4-201ENST00000310546 FLI1Q01543 452 aaPredicted RBP16.99■□□□□ 0.31
SPSB4-201ENST00000310546 MC1RQ01726 317 aa16.99■□□□□ 0.31
SPSB4-201ENST00000310546 RAB40BQ12829 278 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms