RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLC52A3Q9NQ40 469 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 EQTNQ9NQ60 294 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 GPATCH2Q9NW75 528 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 DTX4Q9Y2E6 619 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 CROCCQ5TZA2 2017 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 OR6C70A6NIJ9 312 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 PPM1BO75688 479 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 SLC25A12O75746 678 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 NADKO95544 446 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CAPN3P20807 821 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 SOX3P41225 446 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 KHKP50053 298 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 SF3A3Q12874 501 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CYLC2Q14093 348 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 EFR3AQ14156 821 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 UBAP2LQ14157 1087 aaKnown RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 ZNF169Q14929 603 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 TBCELQ5QJ74 424 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 EXOSC6Q5RKV6 272 aaKnown RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 SAXO2Q658L1 398 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 PCSK4Q6UW60 755 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CCDC197Q8NCU1 140 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 SIMC1Q8NDZ2 872 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 RP9Q8TA86 221 aaKnown RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 GPR151Q8TDV0 419 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 ADAMTS15Q8TE58 950 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 JADE3Q92613 823 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CMTM5Q96DZ9 223 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 LRRC37BQ96QE4 947 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 G6PC3Q9BUM1 346 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 TRIM4Q9C037 500 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 PIGUQ9H490 435 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 ZNF71Q9NQZ8 489 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 EXD2Q9NVH0 621 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CNIH4Q9P003 139 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 CBLCQ9ULV8 474 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 KLF13Q9Y2Y9 288 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 GMEB1Q9Y692 573 aa16.52■□□□□ 0.24
SSSCA1-201ENST00000309328 NDUFAB1O14561 156 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 HS6ST1O60243 411 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 MAN1A2O60476 641 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 PDGFAP04085 211 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 IL12BP29460 328 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 PRDX6P30041 224 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 GABRA3P34903 492 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 PIGAP37287 484 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 PNLIPRP2P54317 469 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 CORO7P57737 925 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 GAB1Q13480 694 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 ZNF791Q3KP31 576 aaPredicted RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 MMEL1Q495T6 779 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 ATAD3BQ5T9A4 648 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 RPUSD3Q6P087 351 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 TMEM81Q6P7N7 255 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 GK5Q6ZS86 529 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 NUP54Q7Z3B4 507 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 RBMXL3Q8N7X1 1067 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 COX18Q8N8Q8 333 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 FAM98AQ8NCA5 519 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 MDS2Q8NDY4 140 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 OR5AK3PQ8NH89 298 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC9A6Q92581 669 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 TMCO6Q96DC7 493 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 OMA1Q96E52 524 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC35A4Q96G79 324 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 INPP5KQ9BT40 448 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 BTBD2Q9BX70 525 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 MYLK2Q9H1R3 596 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 LIN28AQ9H9Z2 209 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 ZBTB20Q9HC78 741 aaPredicted RBP16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 ANAPC2Q9UJX6 822 aa16.51■□□□□ 0.23
SSSCA1-201ENST00000309328 PIEZO2Q9H5I5 2752 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 NEURL1O76050 574 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 OR6B1O95007 311 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 MATN1P21941 496 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 FADDQ13158 208 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 LY6DQ14210 128 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC25A25Q6KCM7 469 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC2A7Q6PXP3 512 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 ANGPTL8Q6UXH0 198 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 IL20RBQ6UXL0 311 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 NPSR1Q6W5P4 371 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC16A11Q8NCK7 471 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 PAQR8Q8TEZ7 354 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 ZFP90Q8TF47 636 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 DIO2Q92813 273 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 COL21A1Q96P44 957 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 TPT1P8Q9HAU6 139 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 PLA2G3Q9NZ20 509 aa16.5■□□□□ 0.23
SSSCA1-201ENST00000309328 BOD1L1Q8NFC6 3051 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SPTA1P02549 2419 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 IL33O95760 270 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 P04436 131 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 SP1P08047 785 aa16.49■□□□□ 0.23
SSSCA1-201ENST00000309328 GUSBP08236 651 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms