RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PRMT9Q6P2P2 845 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TTLL10Q6ZVT0 673 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SYVN1Q86TM6 617 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 NUDCD3Q8IVD9 361 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ULK2Q8IYT8 1036 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 GALNT4Q8N4A0 578 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ZNF248Q8NDW4 579 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 AGAP11Q8TF27 550 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 REPS1Q96D71 796 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 C14orf79Q96F83 325 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SMIM10Q96HG1 83 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TPD52L3Q96J77 140 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 PTCHD1Q96NR3 888 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 MACROD1Q9BQ69 325 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 DPH1Q9BZG8 443 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 AICDAQ9GZX7 198 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 AKIRIN1Q9H9L7 192 aaPredicted RBP7.73□□□□□ -1.17
CHD6-201ENST00000309279 LHX9Q9NQ69 397 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 CRNNQ9UBG3 495 aaPredicted RBP7.73□□□□□ -1.17
CHD6-201ENST00000309279 DHCR7Q9UBM7 475 aaKnown RBP7.73□□□□□ -1.17
CHD6-201ENST00000309279 DSPP15924 2871 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 OR6C76A6NM76 312 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 FOXE1O00358 373 aaPredicted RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 RAD1O60671 282 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 OR4F21O95013 312 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 IFNA14P01570 189 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 ENO1P06733 434 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 ITGAXP20702 1163 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 ARRB2P32121 409 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 EIF2S3P41091 472 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 STXBP1P61764 594 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 SNRPNP63162 240 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 DCDP81605 110 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 ZNF33BQ06732 778 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHD6-201ENST00000309279 RGS1Q08116 209 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 RBBP7Q16576 425 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 NDUFA9Q16795 377 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 FRG2Q64ET8 278 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 KRT80Q6KB66 452 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 GPRIN3Q6ZVF9 776 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 PROSER1Q86XN7 944 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 BHLHE23Q8NDY6 225 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 OR1N1Q8NGS0 311 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 METTL6Q8TCB7 284 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 GLMPQ8WWB7 406 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 MS4A6EQ96DS6 147 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 TRNT1Q96Q11 434 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 FRG2BQ96QU4 278 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 ZBTB18Q99592 522 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 MS4A8Q9BY19 250 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 SLC29A3Q9BZD2 475 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 SLC22A11Q9NSA0 550 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 TXLNGQ9NUQ3 528 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 NKIRAS1Q9NYS0 192 aa7.72□□□□□ -1.17
CHD6-201ENST00000309279 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
CHD6-201ENST00000309279 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 TMEM210A6NLX4 147 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 H0YIG0 161 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 DNAJB6O75190 326 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CIB2O75838 187 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 NSA2O95478 260 aaKnown RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 LGI1O95970 557 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 STATHP02808 62 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 SERPINE1P05121 402 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CAPN1P07384 714 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 OSMP13725 252 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 PTX3P26022 381 aaPredicted RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 HNRNPH1P31943 449 aaKnown RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 ARL1P40616 181 aaPredicted RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 CCR10P46092 362 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 KCNJ5P48544 419 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 MTNR1BP49286 362 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 SCN1BQ07699 218 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CUL3Q13618 768 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.172e-8■■■■□ 22.8
CHD6-201ENST00000309279 TGIF1Q15583 401 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 NKAIN1Q4KMZ8 207 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 TMEM35AQ53FP2 167 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 PLA1AQ53H76 456 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 ARL13AQ5H913 290 aaPredicted RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 SPDYAQ5MJ70 313 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 LCN10Q6JVE6 187 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 NIPAL1Q6NVV3 410 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 ZCCHC23Q6ZST2 131 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 ABHD13Q7L211 337 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 PDSS2Q86YH6 399 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CDYL2Q8N8U2 506 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 OR2L5Q8NG80 312 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CORO2AQ92828 525 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 CMTM7Q96FZ5 175 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 MTERF1Q99551 399 aaKnown RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 C17orf62Q9BQA9 187 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 NAA11Q9BSU3 229 aaPredicted RBP7.71□□□□□ -1.17
CHD6-201ENST00000309279 CACNG6Q9BXT2 260 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 GPR87Q9BY21 358 aa7.71□□□□□ -1.17
CHD6-201ENST00000309279 GSX2Q9BZM3 304 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms