RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TYW3Q6IPR3 259 aaKnown RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 PRSS42Q7Z5A4 293 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 TSPYL5Q86VY4 417 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 OR1L3Q8NH93 324 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 NUDT22Q9BRQ3 303 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 DUSP23Q9BVJ7 150 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 GPR55Q9Y2T6 319 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 U3KQA8 63 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 UNC13CQ8NB66 2214 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 USP34Q70CQ2 3546 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 SYT5O00445 386 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 CLDN4O14493 209 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 AGXTP21549 392 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 HLCSP50747 726 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 RPS6KA3P51812 740 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 MAPK10P53779 464 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 CDK5R2Q13319 367 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 SEC23BQ15437 767 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 RBM48Q5RL73 367 aaKnown RBP20.78■□□□□ 0.92
SMAD1-201ENST00000302085 VWA5B2Q8N398 1253 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 OR52R1Q8NGF1 315 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 OR52P1PQ8NH57 321 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 OR4C6Q8NH72 309 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 PITX2Q99697 317 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 FUZQ9BT04 418 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 DUSP22Q9NRW4 184 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 MAU2Q9Y6X3 613 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 RP1P56715 2156 aa20.78■□□□□ 0.92
SMAD1-201ENST00000302085 ARRDC5A6NEK1 342 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 VGLL3A8MV65 326 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 HYAL3O43820 417 aaPredicted RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 GASTP01350 101 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 CRHBPP24387 322 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 HPCAP84074 193 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 IL5RAQ01344 420 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 PRAMEF17Q5VTA0 474 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 DHRS4L2Q6PKH6 230 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 TTLL10Q6ZVT0 673 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 CCDC71Q8IV32 467 aaPredicted RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 TAGAPQ8N103 731 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 SETD9Q8NE22 299 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 PIK3R3Q92569 461 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 RBM18Q96H35 190 aaKnown RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 STACQ99469 402 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 ARHGDIGQ99819 225 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 ADNPQ9H2P0 1102 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 POFUT2Q9Y2G5 429 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 WDR45Q9Y484 360 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 SMIM31A0A1B0GVY4 71 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 SIGLEC6O43699 453 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 POU2F1P14859 743 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 MAOAP21397 527 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 ELAVL4P26378 380 aaKnown RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 PRKAR1BP31321 381 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 GCGRP47871 477 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 PEAR1Q5VY43 1037 aaPredicted RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 Q6ZPB1 254 aaPredicted RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 GALNT12Q8IXK2 581 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 CLIP4Q8N3C7 705 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 ADAMTS16Q8TE57 1224 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 HOXB13Q92826 284 aaPredicted RBP20.77■□□□□ 0.92
SMAD1-201ENST00000302085 RIT1Q92963 219 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 FBXO34Q9NWN3 711 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 NDUFA13Q9P0J0 144 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 AASSQ9UDR5 926 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 HSPE1-MOB4S4R3N1 261 aa20.77■□□□□ 0.92
SMAD1-201ENST00000302085 CPED1A4D0V7 1026 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF749O43361 778 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 CFIP05156 583 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 PNLIPP16233 465 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GABRA3P34903 492 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 SMIM11AP58511 58 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 NR0B2Q15466 257 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 FGD3Q5JSP0 725 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 PERM1Q5SV97 790 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GUSBP11Q6P575 273 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 TMPRSS9Q7Z410 1059 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 KMT5CQ86Y97 462 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 TMEM105Q8N8V8 129 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 AQP11Q8NBQ7 271 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 CNIH3Q8TBE1 160 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GPR151Q8TDV0 419 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GTPBP3Q969Y2 492 aaKnown RBP20.76■□□□□ 0.91
SMAD1-201ENST00000302085 TMIGD2Q96BF3 282 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ZC3H10Q96K80 434 aaKnown RBP20.76■□□□□ 0.91
SMAD1-201ENST00000302085 HRASLS5Q96KN8 279 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 PRR14Q9BWN1 585 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF350Q9GZX5 532 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 TMCC3Q9ULS5 477 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 HRKO00198 91 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ATXN8OSP0DMR3 200 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ALAS2P22557 587 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 OR1D4P47884 311 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 HSD17B7P56937 341 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 DCST1Q5T197 706 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 DCST2Q5T1A1 773 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF574Q6ZN55 896 aaPredicted RBP20.76■□□□□ 0.91
SMAD1-201ENST00000302085 COX18Q8N8Q8 333 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 UBE2FQ969M7 185 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms