RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 B3GNT4Q9C0J1 378 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 NLGN3Q9NZ94 848 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 KCND3Q9UK17 655 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM5Q9Y2B1 443 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 NTNG1Q9Y2I2 539 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 OR51B4Q9Y5P0 310 aa13.82□□□□□ -0.2
COL6A2-201ENST00000300527 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 TPOP07202 933 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 HSD3B1P14060 373 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 HSD3B2P26439 372 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ACVR1BP36896 505 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 GRK1Q15835 563 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 C9orf131Q5VYM1 1079 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 FAM71E1Q6IPT2 247 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 DDX53Q86TM3 631 aaKnown RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ADGRF3Q8IZF5 1079 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 CBARPQ8N350 705 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF527Q8NB42 609 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 COQ8AQ8NI60 647 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 GIMAP1Q8WWP7 306 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 GPR137Q96N19 417 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ABHD1Q96SE0 405 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 OR51I1Q9H343 314 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 FLVCR2Q9UPI3 526 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 TRDV1A0A1B0GX56 115 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 UGDHO60701 494 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 PRKRAO75569 313 aaKnown RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 TCRBP04435 133 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 SLC6A1P30531 599 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ACSL1P33121 698 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 SMIM11AP58511 58 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 RAB40BQ12829 278 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 GPR68Q15743 365 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 LIPIQ6XZB0 460 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 RTL4Q6ZR62 310 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 RASSF6Q6ZTQ3 369 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 KCTD20Q7Z5Y7 419 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 NR2C2APQ86WQ0 139 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 OR10H4Q8NGA5 316 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 PDXPQ96GD0 296 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ARHGAP9Q9BRR9 750 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 A4GNTQ9UNA3 340 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 EXOSC1Q9Y3B2 195 aaKnown RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 PRR23D1E9PI22 279 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 QSOX1O00391 747 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 STK25O00506 426 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 SEC14L5O43304 696 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 SOCS5O75159 536 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 PRR23D2P0DMB1 279 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF782Q6ZMW2 699 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 SIAH3Q8IW03 269 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 OR8K5Q8NH50 307 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 GANCQ8TET4 914 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 NXPE2Q96DL1 559 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 MED18Q9BUE0 208 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 CWH43Q9H720 699 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 CFAP97Q9P2B7 532 aa13.81□□□□□ -0.2
COL6A2-201ENST00000300527 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-201ENST00000300527 REM1O75628 298 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 RB1P06400 928 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 MFSD13AQ14CX5 517 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 SPOUT1Q5T280 376 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PRICKLE2Q7Z3G6 844 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 CAMKMTQ7Z624 323 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 ESX1Q8N693 406 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 SRFBP1Q8NEF9 429 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 ARSGQ96EG1 525 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 ALG14Q96F25 216 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 TNFRSF10DQ9UBN6 386 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 H7C4K7 107 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 SLC16A5O15375 505 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 ALDOBP05062 364 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 C1GALT1C1LP0DN25 315 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PAICSP22234 425 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 KELP23276 732 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PPP2R1BP30154 601 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 KCNJ5P48544 419 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PITPNBP48739 271 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 DGCR2P98153 550 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 KIAA0907Q7Z7F0 614 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 RASGEF1AQ8N9B8 481 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 TRMT10AQ8TBZ6 339 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 AUTS2Q8WXX7 1259 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 RBPMSQ93062 196 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM169Q96HH4 297 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 LINC00052Q96N35 136 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 DDOQ99489 341 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 A0A1W2PPL8 197 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms