RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 WRAP73Q9P2S5 460 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 KCNK6Q9Y257 313 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 SLC6A5Q9Y345 797 aa14.15□□□□□ -0.14
SCN3B-201ENST00000299333 AK6Q9Y3D8 172 aaKnown RBP14.15□□□□□ -0.14
SCN3B-201ENST00000299333 H7BY64 318 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 LIPCP11150 499 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 FASLGP48023 281 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 NDUFA6P56556 154 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 PDSS1Q5T2R2 415 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 ADGRF1Q5T601 910 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 HIST2H3PS2Q5TEC6 136 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 TTLL10Q6ZVT0 673 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 COX15Q7KZN9 410 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 PARP16Q8N5Y8 322 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 KDM1BQ8NB78 822 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 OR4K14Q8NGD5 310 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 OR8D2Q9GZM6 311 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 RRAGCQ9HB90 399 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 GLTPQ9NZD2 209 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 B3GNT3Q9Y2A9 372 aa14.15□□□□□ -0.15
SCN3B-201ENST00000299333 MST1RQ04912 1400 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 A6NIN4 97 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 UBBP0CG47 229 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 UBCP0CG48 685 aaKnown RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ARAFP10398 606 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 SCNN1AP37088 669 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 POLR2HP52434 150 aaKnown RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 SLAMF1Q13291 335 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TATDN3Q17R31 274 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ARHGAP11AQ6P4F7 1023 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM173Q86WV6 379 aaPredicted RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM156Q8N614 296 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 OR4K13Q8NH42 304 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 OR5AK2Q8NH90 309 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 HOXB13Q92826 284 aaPredicted RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TGM7Q96PF1 710 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 HCRTR2O43614 444 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ADORA3P0DMS8 318 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 GIFP27352 417 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 LIPJQ5W064 366 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 SERPINA12Q8IW75 414 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 MOB1AQ9H8S9 216 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 KCNK12Q9HB15 430 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ANHXE9PGG2 379 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 HPGDSO60760 199 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 SLC35E2BP0CK96 405 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TIA1P31483 386 aaKnown RBP eCLIP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 WNT4P56705 351 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 FAM189BP81408 668 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 KCNC3Q14003 757 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ALKAL2Q6UX46 152 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF783Q6ZMS7 281 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 BORCS7Q96B45 105 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 FAM86C1Q9NVL1 165 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 DZANK1Q9NVP4 752 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 FNIP2Q9P278 1114 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 CLEC3AO75596 197 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 PTPN2P17706 415 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 TAS2R20P59543 309 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 AARDQ4LEZ3 155 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 BRAT1Q6PJG6 821 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 SUN3Q8TAQ9 357 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 MAL2Q969L2 176 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.14□□□□□ -0.15
SCN3B-201ENST00000299333 DKKL1Q9UK85 242 aa14.14□□□□□ -0.15
SCN3B-201ENST00000299333 NAP1L6A6NFF2 107 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF860A6NHJ4 632 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 NRP1O14786 923 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 FBXO45P0C2W1 286 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 GAAP10253 952 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 BLKP51451 505 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 VSX2P58304 361 aaPredicted RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 FXNQ16595 210 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM107Q6UX40 140 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF808Q8N4W9 903 aaPredicted RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 OR9Q2Q8NGE9 314 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SLC6A16Q9GZN6 736 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ZFP57Q9NU63 452 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 CPED1A4D0V7 1026 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 HHLA1C9JL84 531 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ETFAP13804 333 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 HNF1AP20823 631 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 KCNQ1P51787 676 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SPCS2Q15005 226 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 DHCR24Q15392 516 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 VAMP3Q15836 100 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 TPRG1Q6ZUI0 275 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 DENND1AQ8TEH3 1009 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 MITD1Q8WV92 249 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 NTPCRQ9BSD7 190 aaKnown RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 GCM1Q9NP62 436 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 HEMK1Q9Y5R4 338 aaPredicted RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 MMP20O60882 483 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 PTBP3O95758 552 aaKnown RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ARHGAP40Q5TG30 622 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms