RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FGF11Q92914 225 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 TMEM246Q9BRR3 403 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 SF3B6Q9Y3B4 125 aaKnown RBP22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 CSNK1G3Q9Y6M4 447 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 SYNDIG1LA6NDD5 238 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 MAN2B1O00754 1011 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 PIP5K1CO60331 668 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 CELP19835 753 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 SLC9A3P48764 834 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.91■■□□□ 1.263e-8■□□□□ 8.2
SPTSSA-201ENST00000298130 DDI2Q5TDH0 399 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 TMIEQ8NEW7 156 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 COL26A1Q96A83 441 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 COX14Q96I36 57 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 NDEL1Q9GZM8 345 aa22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 POLMQ9NP87 494 aaPredicted RBP22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 ACSS1Q9NUB1 689 aaPredicted RBP22.91■■□□□ 1.26
SPTSSA-201ENST00000298130 ZC3H12DA2A288 527 aaKnown RBP22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 B4DXG7 233 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 ADH1CP00326 375 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 IL1AP01583 271 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 NTSP30990 170 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 PLK5Q496M5 336 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 ETFBKMTQ8IXQ9 262 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SHISA5Q8N114 240 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 OR2A1Q8NGT9 310 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SETD6Q8TBK2 473 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 TMEM163Q8TC26 289 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 NACC2Q96BF6 587 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 WDFY2Q96P53 400 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SMAD5Q99717 465 aaKnown RBP22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SERGEFQ9UGK8 458 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SNX7Q9UNH6 387 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 CLCA2Q9UQC9 943 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SCN2AQ99250 2005 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SLC9A3R1O14745 358 aaPredicted RBP22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 HRO43593 1189 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 ACP2P11117 423 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 ERGP11308 486 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 FUT1P19526 365 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 S100A1P23297 94 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 EFNB1P98172 346 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 KRT33BQ14525 404 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 Q5BKY6 102 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 ZNF765Q7L2R6 523 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 FBXL6Q8N531 539 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 TMEM145Q8NBT3 493 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 SLC22A4Q9H015 551 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 CHST2Q9Y4C5 530 aa22.9■■□□□ 1.26
SPTSSA-201ENST00000298130 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 SLC30A4O14863 429 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 PRODHO43272 600 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 MYL9P24844 172 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 TRIM23P36406 574 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 KHKP50053 298 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 RAB25P57735 213 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 COX10Q12887 443 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 SLC9A5Q14940 896 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 RRM2BQ7LG56 351 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 ACOT4Q8N9L9 421 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 OR4Q3Q8NH05 313 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 OTUB2Q96DC9 234 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 PPP1R16AQ96I34 528 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 TBX5Q99593 518 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 OR2B2Q9GZK3 357 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 GRIP1Q9Y3R0 1128 aa22.89■■□□□ 1.26
SPTSSA-201ENST00000298130 A0A1B0GVC2 190 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 A6NIN4 97 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 POLR1CO15160 346 aaPredicted RBP22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 GUCY1B2O75343 617 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 AIFM1O95831 613 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 CDH11P55287 796 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 UBE3AQ05086 875 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 CNIH2Q6PI25 160 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC36A4Q6YBV0 504 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 VASH1Q7L8A9 365 aaPredicted RBP22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 UFD1Q92890 307 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 MSLNLQ96KJ4 702 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 CCDC85BQ15834 202 aaPredicted RBP22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF513Q8N8E2 541 aaPredicted RBP22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 SUSD6Q92537 303 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 SPHK1Q9NYA1 384 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 INSL6Q9Y581 213 aa22.89■■□□□ 1.25
SPTSSA-201ENST00000298130 MID1O15344 667 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 UBXN7O94888 489 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 ATP6V1E1P36543 226 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 BNC1Q01954 994 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 PRDX1Q06830 199 aaKnown RBP22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 KLHL22Q53GT1 634 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 C6orf132Q5T0Z8 1188 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 XKRXQ6PP77 449 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 PAWRQ96IZ0 340 aaKnown RBP22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 OR7D2Q96RA2 312 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 SLC13A4Q9UKG4 626 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 TBX19O60806 448 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 ZIC2O95409 532 aaPredicted RBP22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 TIMP1P01033 207 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 PSKH1P11801 424 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 ZNF24P17028 368 aa22.88■■□□□ 1.25
SPTSSA-201ENST00000298130 GAB4Q2WGN9 574 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms