RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CNOT3O75175 753 aaKnown RBP11.03□□□□□ -0.64
RHO-201ENST00000296271 RPLP0P05388 317 aaKnown RBP11.03□□□□□ -0.64
RHO-201ENST00000296271 TYRP1P17643 537 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 CPN2P22792 545 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 GPR4P46093 362 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 GIPRP48546 466 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 LIMK1P53667 647 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 TAS2R41P59536 307 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 SRP54P61011 504 aaKnown RBP11.03□□□□□ -0.64
RHO-201ENST00000296271 DUSP5Q16690 384 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 TRIM16LQ309B1 348 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 C16orf62Q7Z3J2 963 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 DEFB119Q8N690 84 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 ZFPM2Q8WW38 1151 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 PIK3R3Q92569 461 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 LRR1Q96L50 414 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 CNPPD1Q9BV87 410 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 C1QTNF7Q9BXJ2 289 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 ADAP2Q9NPF8 381 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 FBXO8Q9NRD0 319 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 CD207Q9UJ71 328 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 ZNF780BQ9Y6R6 833 aa11.03□□□□□ -0.64
RHO-201ENST00000296271 DMDP11532 3685 aa11.02□□□□□ -0.64
RHO-201ENST00000296271 SYNDIG1LA6NDD5 238 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 SHISA7A6NL88 538 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 CTDSP2O14595 271 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 MRPS14O60783 128 aaKnown RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 SLC2A10O95528 541 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 GKN3PP0CG01 181 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ZNF12P17014 697 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 GABRG2P18507 467 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ALDH6A1Q02252 535 aaKnown RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 TGM3Q08188 693 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 EXOSC7Q15024 291 aaKnown RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 GPR68Q15743 365 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 MAPK14Q16539 360 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ZNF404Q494X3 552 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 SYT14P1Q58G82 188 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 OR2G6Q5TZ20 316 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 FIGLAQ6QHK4 219 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 FAM92BQ6ZTR7 304 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ZNF554Q86TJ5 538 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 NATD1Q8N6N6 113 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 BBS10Q8TAM1 723 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 TMEM255BQ8WV15 326 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 RLN3Q8WXF3 142 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 FCGR1BQ92637 280 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ZNF764Q96H86 408 aaPredicted RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 CDCA4Q9BXL8 241 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 BCL2L10Q9HD36 194 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 GIN1Q9NXP7 522 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 SLC9A8Q9Y2E8 581 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 LSM2Q9Y333 95 aaKnown RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 COL6A3P12111 3177 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 LRRC72A6NJI9 287 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 TBX1O43435 398 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ETV5P41161 510 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 RFX3P48380 749 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ETV1P50549 477 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 BCAP31P51572 246 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 STXBP1P61764 594 aaKnown RBP11.02□□□□□ -0.65
RHO-201ENST00000296271 LIPKQ5VXJ0 399 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 SLC30A6Q6NXT4 461 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 TMEM64Q6YI46 380 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 DGAT2L6Q6ZPD8 337 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ZFP41Q8N8Y5 198 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 PRRC1Q96M27 445 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 SARGQ9BW04 601 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 LMAN2LQ9H0V9 348 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 TPK1Q9H3S4 243 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 ACTR10Q9NZ32 417 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 NCKAP1Q9Y2A7 1128 aa11.02□□□□□ -0.65
RHO-201ENST00000296271 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 H0YGG7 62 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 FGF17O60258 216 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 CYP7B1O75881 506 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ALPPP05187 535 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 CT62P0C5K7 136 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ACP2P11117 423 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 GNSP15586 552 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 HNRNPA2B1P22626 353 aaKnown RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 CD40LGP29965 261 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ARF3P61204 181 aaPredicted RBP11.01□□□□□ -0.65
RHO-201ENST00000296271 PRR5P85299 388 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 MXD1Q05195 221 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 OXA1LQ15070 435 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 SNAPC1Q16533 368 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ENTPD8Q5MY95 495 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 MFSD12Q6NUT3 480 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 OR56A1Q8NGH5 318 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 OR52P1PQ8NH57 321 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 ADAMTS15Q8TE58 950 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 GAL3ST3Q96A11 431 aa11.01□□□□□ -0.65
RHO-201ENST00000296271 NEURL2Q9BR09 285 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms