RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PAHP00439 452 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 GNSP15586 552 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 UQCRC1P31930 480 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 TAS2R41P59536 307 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 SETD7Q8WTS6 366 aaKnown RBP25.84■■□□□ 1.73
CBX4-201ENST00000269397 SPRYD4Q8WW59 207 aaPredicted RBP25.84■■□□□ 1.73
CBX4-201ENST00000269397 NTNG1Q9Y2I2 539 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 SLC2A10O95528 541 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 C8AP07357 584 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 TM4SF4P48230 202 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 C19orf57Q0VDD7 668 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 MAB21L1Q13394 359 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SF3A2Q15428 464 aaKnown RBP25.83■■□□□ 1.73
CBX4-201ENST00000269397 DUSP6Q16828 381 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SIGIRRQ6IA17 410 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 KIAA1211LQ6NV74 962 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 NR2C2APQ86WQ0 139 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 KLBQ86Z14 1044 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SLC38A2Q96QD8 506 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 KCNJ15Q99712 375 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SPHK2Q9NRA0 654 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 GPR55Q9Y2T6 319 aaPredicted RBP25.83■■□□□ 1.73
CBX4-201ENST00000269397 CDH10Q9Y6N8 788 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SNTNA6NMZ2 147 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 ERAL1O75616 437 aaKnown RBP25.83■■□□□ 1.73
CBX4-201ENST00000269397 ATP6V1E1P36543 226 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 NCBP2P52298 156 aaKnown RBP eCLIP25.83■■□□□ 1.733e-8■□□□□ 10.1
CBX4-201ENST00000269397 MRPL28Q13084 256 aaKnown RBP25.83■■□□□ 1.73
CBX4-201ENST00000269397 IDNKQ5T6J7 187 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 LCTLQ6UWM7 567 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 PLA2G15Q8NCC3 412 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 SAGE1Q9NXZ1 904 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 EXTL2Q9UBQ6 330 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 WNT6Q9Y6F9 365 aa25.83■■□□□ 1.73
CBX4-201ENST00000269397 CXorf51AA0A1B0GTR3 108 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 TSPAN11A1L157 253 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 ACP5P13686 325 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 TRIM23P36406 574 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 FRKP42685 505 aaPredicted RBP25.82■■□□□ 1.72
CBX4-201ENST00000269397 AMIGO1Q86WK6 493 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 TIGD4Q8IY51 512 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 C16orf58Q96GQ5 468 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 GSAPA4D1B5 854 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 OR1F1O43749 312 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 SP3Q02447 781 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 VASNQ6EMK4 673 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 UBE3DQ7Z6J8 389 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 FAM109AQ8N4B1 249 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 RAD51AP1Q96B01 352 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 PHF21AQ96BD5 680 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 MED30Q96HR3 178 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 AMDHD1Q96NU7 426 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 C17orf62Q9BQA9 187 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 HCFC2Q9Y5Z7 792 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 CSNK1G3Q9Y6M4 447 aa25.82■■□□□ 1.72
CBX4-201ENST00000269397 A0A1W2PS29 197 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SPINT1O43278 529 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SLC43A1O75387 559 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 HLA-DPB1P04440 258 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SDHBP21912 280 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 PIP5KL1Q5T9C9 394 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 FAM205BPQ63HN1 556 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 NUDT13Q86X67 352 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 OR4Q3Q8NH05 313 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SECISBP2Q96T21 854 aaKnown RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 AIF1LQ9BQI0 150 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 DPH7Q9BTV6 452 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 GTPBP2Q9BX10 602 aaKnown RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 EPHX3Q9H6B9 360 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SLC28A3Q9HAS3 691 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 ISYNA1Q9NPH2 558 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SRRDQ9UH36 339 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 HEATR5BQ9P2D3 2071 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 A0A0C4DFX4 3053 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 FAM183AA6NL82 134 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 INHAP05111 366 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 GSTM3P21266 225 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 NDUFAF5Q5TEU4 345 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 TRILQ7L0X0 811 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 ADCK2Q7Z695 626 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SIX5Q8N196 739 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 SMG7Q92540 1137 aaKnown RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 AKAP1Q92667 903 aaKnown RBP eCLIP25.81■■□□□ 1.722e-7■■■■□ 26
CBX4-201ENST00000269397 COQ10AQ96MF6 247 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 ISG20L2Q9H9L3 353 aaKnown RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 SEMA4GQ9NTN9 838 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 NUP210Q8TEM1 1887 aaPredicted RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 LRRK1Q38SD2 2015 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 MYO7AQ13402 2215 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 KDM4EB2RXH2 506 aaPredicted RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 NDUFS4O43181 175 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 LCMT2O60294 686 aaKnown RBP25.81■■□□□ 1.72
CBX4-201ENST00000269397 C8orf89P0DMQ9 161 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 GPR4P46093 362 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 TMEM91Q6ZNR0 172 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 EQTNQ9NQ60 294 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 TM7SF3Q9NS93 570 aa25.81■■□□□ 1.72
CBX4-201ENST00000269397 KIAA0355O15063 1070 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 FABP7O15540 132 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 TRIM3O75382 744 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms