RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LYNP07948 512 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 PABPC4LP0CB38 370 aaKnown RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 MYF6P23409 242 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 ACP1P24666 158 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 RORAP35398 523 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 LIMS1P48059 325 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 RHAGQ02094 409 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 ZFP36L1Q07352 338 aaKnown RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 ARHGAP40Q5TG30 622 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 TYW3Q6IPR3 259 aaKnown RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 TCTN3Q6NUS6 607 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 DHRS4L2Q6PKH6 230 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 USP51Q70EK9 711 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 ZG16BQ96DA0 208 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 DHRS1Q96LJ7 313 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 PTCHD1Q96NR3 888 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 C11orf16Q9NQ32 467 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 ACER3Q9NUN7 267 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 RARRES3Q9UL19 164 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 HCN4Q9Y3Q4 1203 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 TESMINQ9Y4I5 508 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 PCDHGB5Q9Y5G0 923 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 HEMK1Q9Y5R4 338 aaPredicted RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 J3KTA2 159 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 HRKO00198 91 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 TNFRSF11BO00300 401 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 FLRT2O43155 660 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 SEMA7AO75326 666 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 ALPPP05187 535 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 GUSBP08236 651 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 UBTFL6P0CB48 400 aaPredicted RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 SSTR4P31391 388 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 DAPP51397 102 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 CHN2P52757 468 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 HPCAP84074 193 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 EPS8Q12929 822 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 BLMHQ13867 455 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 ZNF267Q14586 743 aaPredicted RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 RFX4Q33E94 735 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 C1orf189Q5VU69 101 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 KDM4DQ6B0I6 523 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 LAIR1Q6GTX8 287 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 COX15Q7KZN9 410 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 CYP4Z1Q86W10 505 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 BPHLQ86WA6 291 aaPredicted RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 PMM1Q92871 262 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 VSTM2LQ96N03 204 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 WFDC6Q9BQY6 131 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 YIPF2Q9BWQ6 316 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 TGIF2Q9GZN2 237 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 QRSL1Q9H0R6 528 aaKnown RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 FOLH1BQ9HBA9 442 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 MKKSQ9NPJ1 570 aaPredicted RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 SLC22A11Q9NSA0 550 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 PDP1Q9P0J1 537 aaPredicted RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 ACAD8Q9UKU7 415 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 FAM32AQ9Y421 112 aaKnown RBP15.23■□□□□ 0.03
TPM1-201ENST00000267996 WDR45Q9Y484 360 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 ZNF318Q5VUA4 2279 aa15.23■□□□□ 0.03
TPM1-201ENST00000267996 IGLV3-12A0A075B6K2 115 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 FFAR1O14842 300 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PRAMEF2O60811 474 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 TIAF1O95411 115 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 ALBP02768 609 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 RPS4Y1P22090 263 aaKnown RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 PRKAR1BP31321 381 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 GABRA3P34903 492 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 YAP1P46937 504 aaKnown RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 EFNA3P52797 238 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PSG6Q00889 435 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 SPIBQ01892 262 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 ZNF155Q12901 538 aaPredicted RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 LAPTM4AQ15012 233 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 DCST2Q5T1A1 773 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PRR23CQ6ZRP0 262 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 LACC1Q8IV20 430 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 COX18Q8N8Q8 333 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 SLC38A9Q8NBW4 561 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 CYGBQ8WWM9 190 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 MBOAT4Q96T53 435 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 ARHGDIGQ99819 225 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 TOR3AQ9H497 397 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 POLE3Q9NRF9 147 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 CHST2Q9Y4C5 530 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 CACNA1HO95180 2353 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 MYO15AQ9UKN7 3530 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 TCRBV16S1A1N1A0A5B0 115 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 FAM86C2PA6NEL3 165 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 TTC36A6NLP5 189 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 HS6ST1O60243 411 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 STX11O75558 287 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 CLPSP04118 112 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 IFNA16P05015 189 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 GNAO1P09471 354 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 FGF5P12034 268 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 POU6F2P78424 691 aaPredicted RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 VWA2Q5GFL6 755 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms