RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 NUDT1P36639 197 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 FAM111BQ6SJ93 734 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 OR8J1Q8NGP2 316 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 HDHD5Q9BXW7 423 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 ATG2BQ96BY7 2078 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SLC16A5O15375 505 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 UNGP13051 313 aaPredicted RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 HLA-EP13747 358 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TSFMP43897 325 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MTNR1AP48039 350 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TIGD3Q6B0B8 471 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SMYD5Q6GMV2 418 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 C2CD4AQ8NCU7 369 aaPredicted RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 OR51J1Q9H342 316 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 GOLGA2P5Q9HBQ8 144 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 LOC102723532A0A0G2JNH3 316 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 LOC730098B7Z3J9 87 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 RTCAO00442 366 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 DIRAS1O95057 198 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 CFIP05156 583 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 BDKRB1P46663 353 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SLAMF1Q13291 335 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SLC10A1Q14973 349 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NANOGP8Q6NSW7 305 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TMEM150AQ86TG1 271 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TFGQ92734 400 aaPredicted RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 PAPOLGQ9BWT3 736 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 GON7Q9BXV9 100 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NANOGQ9H9S0 305 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MRPL15Q9P015 296 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 A0A1W2PPV4 95 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 CBY3A6NI87 242 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 A6NLC8 198 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MAS1P04201 325 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 ALPIP09923 528 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NDUFV2P19404 249 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 POU4F3Q15319 338 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 HACD4Q5VWC8 232 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 LIX1LQ8IVB5 337 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 RAB39BQ96DA2 213 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 IL21RQ9HBE5 538 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 HAO2Q9NYQ3 351 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MAFBQ9Y5Q3 323 aaPredicted RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 A0A087WUU8 490 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 JUNDP17535 347 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MBLAC2Q68D91 279 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 LYSMD3Q7Z3D4 306 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TEX26Q8N6G2 289 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 OR2T4Q8NH00 348 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 IL20RAQ9UHF4 553 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 DLGAP4Q9Y2H0 992 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SPTBP11277 2137 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 FAM221BA6H8Z2 402 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 DENRO43583 198 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 CKMT1AP12532 417 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 NPRL3Q12980 569 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 UBXN2BQ14CS0 331 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 C15orf52Q6ZUT6 534 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SLC7A5P1Q8MH63 180 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 GTF2H4Q92759 462 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 RELTQ969Z4 430 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
SRRM4-201ENST00000267260 SEC16AO15027 2179 aa11.54□□□□□ -0.56
SRRM4-201ENST00000267260 A0A1W2PPK0 400 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 PMM2O15305 246 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 PRPS1P60891 318 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 ARHGAP19Q14CB8 494 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 PCLAFQ15004 111 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 CLVS2Q5SYC1 327 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 ZNF783Q6ZMS7 281 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 ABHD12BQ7Z5M8 362 aaPredicted RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 OR5L2Q8NGL0 311 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 OR5AK2Q8NH90 309 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 HOXD1Q9GZZ0 328 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 ZNF230Q9UIE0 474 aaPredicted RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 SLIT2O94813 1529 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 ACOT7O00154 380 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 NUPL2O15504 423 aaKnown RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 GABRA3P34903 492 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 RPS15AP62244 130 aaKnown RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 LRRC25Q8N386 305 aaPredicted RBP11.53□□□□□ -0.56
SRRM4-201ENST00000267260 RHEBL1Q8TAI7 183 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 HMGB4Q8WW32 186 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 OCSTAMPQ9BR26 566 aa11.53□□□□□ -0.56
SRRM4-201ENST00000267260 FAM118AQ9NWS6 357 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms