RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 H0YAE9 185 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 HCRTR1O43613 425 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 XPNPEP2O43895 674 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CTNSO60931 367 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CNOT3O75175 753 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 GKN3PP0CG01 181 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 C7P10643 843 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 DUSP5Q16690 384 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 PLK5Q496M5 336 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 NHSL2Q5HYW2 709 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 DCST2Q5T1A1 773 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 MRM1Q6IN84 353 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 TMEM64Q6YI46 380 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 SPRED1Q7Z699 444 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 MEX3DQ86XN8 651 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 OR52E4Q8NGH9 312 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 DNASE2BQ8WZ79 361 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 MR1Q95460 341 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 SH3YL1Q96HL8 342 aaPredicted RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 ARRDC1-AS1Q9H2J1 176 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 A4GALTQ9NPC4 353 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 EXOSC4Q9NPD3 245 aaKnown RBP8.72□□□□□ -1.01
SSR3-201ENST00000265044 OLAHQ9NV23 265 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 AASSQ9UDR5 926 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CFL2Q9Y281 166 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 KCNE3Q9Y6H6 103 aa8.72□□□□□ -1.01
SSR3-201ENST00000265044 CDC14CA4D256 554 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 PRKNO60260 465 aaPredicted RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 PRAMEF2O60811 474 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 NSA2O95478 260 aaKnown RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 HPRP00739 348 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 CTSBP07858 339 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 TFPTP0C1Z6 253 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 SLC35E2P0CK97 266 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 EPHA8P29322 1005 aaPredicted RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 PDX1P52945 283 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 ARFIP1P53367 373 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 PSMD4P55036 377 aaKnown RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 KCNJ10P78508 379 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 METTL25Q8N6Q8 603 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 OR52L1Q8NGH7 329 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 UCK2Q9BZX2 261 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 AMBRA1Q9C0C7 1298 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 SIRT3Q9NTG7 399 aaPredicted RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 GPATCH2Q9NW75 528 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 TMEM9Q9P0T7 183 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.71□□□□□ -1.01
SSR3-201ENST00000265044 TMEM221A6NGB7 291 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 M0R296 226 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 B4GAT1O43505 415 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 SCRG1O75711 98 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 CLK1P49759 484 aaKnown RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 HNRNPFP52597 415 aaKnown RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 PIGFQ07326 219 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 FZD5Q13467 585 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 RAPSNQ13702 412 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 FAM53BQ14153 422 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 CMPK2Q5EBM0 449 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 GPR107Q5VW38 600 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 SMARCD3Q6STE5 483 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 UGT2A3Q6UWM9 527 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 TMEM179BQ7Z7N9 219 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 PPP1R3BQ86XI6 285 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 PRR22Q8IZ63 422 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 CEP76Q8TAP6 659 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 SLC35A4Q96G79 324 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 NODALQ96S42 347 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 NPLQ9BXD5 320 aaPredicted RBP8.71□□□□□ -1.01
SSR3-201ENST00000265044 NTN4Q9HB63 628 aa8.71□□□□□ -1.01
SSR3-201ENST00000265044 TRIOO75962 3097 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 SNTNA6NMZ2 147 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 C9J4A7 227 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 K7ESF4 209 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 CH25HO95992 272 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 CSTAP01040 98 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 TCEA1P23193 301 aaKnown RBP8.71□□□□□ -1.02
SSR3-201ENST00000265044 MYBPC1Q00872 1141 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 MICAQ29983 383 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 SLC36A3Q495N2 470 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 NADK2Q4G0N4 442 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 PMS2CLQ68D20 193 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 KCTD8Q6ZWB6 473 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 RNF44Q7L0R7 432 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 CYP4Z2PQ8N1L4 340 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 OR4K5Q8NGD3 323 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.71□□□□□ -1.02
SSR3-201ENST00000265044 DEPDC7Q96QD5 511 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 TBL1XR1Q9BZK7 514 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 FAM192AQ9GZU8 254 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 SRPK3Q9UPE1 567 aa8.71□□□□□ -1.02
SSR3-201ENST00000265044 SCDO00767 359 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 TBX19O60806 448 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 MFN2O95140 757 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 FADS2O95864 444 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 CHRM4P08173 479 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 FOLR1P15328 257 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 RPL4P36578 427 aaKnown RBP8.7□□□□□ -1.02
SSR3-201ENST00000265044 GPR3P46089 330 aa8.7□□□□□ -1.02
SSR3-201ENST00000265044 KCNJ5P48544 419 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms