RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SLC9A8Q9Y2E8 581 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MRPS23Q9Y3D9 190 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 GPSM3Q9Y4H4 160 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 DENND4CQ5VZ89 1909 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 NPIPA5A0A0B4J1W7 369 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 NPIPA7E9PJI5 369 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 SLC30A4O14863 429 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 PLOD3O60568 738 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MRPL3P09001 348 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 NPIPA8P0DM63 369 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 AHRP35869 848 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 ETV6P41212 452 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 CDH11P55287 796 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 PCBP4P57723 403 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 CSTF1Q05048 431 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 ZNF77Q15935 545 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 TATDN3Q17R31 274 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 ZNF658BQ4V348 819 aaPredicted RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 KLHL12Q53G59 568 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 OR4C11Q6IEV9 310 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 RGMAQ96B86 450 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 OR2B2Q9GZK3 357 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 ISG20L2Q9H9L3 353 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 RPRD1BQ9NQG5 326 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 SLC35C2Q9NQQ7 365 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 CACNA1IQ9P0X4 2223 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 IGKV1-8A0A0C4DH67 115 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 ISM1B1AKI9 464 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 SRPRAP08240 638 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 SLC35G4P0C7Q5 338 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 QPRTQ15274 297 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 GLYR1Q49A26 553 aaPredicted RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 IDNKQ5T6J7 187 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 PLET1Q6UQ28 207 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 DCUN1D3Q8IWE4 304 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 NRMQ8IXM6 262 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 YIPF7Q8N8F6 280 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 TMEM255BQ8WV15 326 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 SLC7A6Q92536 515 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 UFD1Q92890 307 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 CNRIP1Q96F85 164 aaPredicted RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 SECISBP2Q96T21 854 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 HDHD2Q9H0R4 259 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 RHBGQ9H310 441 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 NEUROD4Q9HD90 331 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 ITGB1BP2Q9UKP3 347 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 PCDHGB2Q9Y5G2 931 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 SNRNP200O75643 2136 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 CACNA1CQ13936 2221 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 FAM240BA0A1B0GVZ2 78 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 A0A1W2PR48 441 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 MAGEB4O15481 346 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 REM1O75628 298 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 PDE9AO76083 593 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 PRNPP04156 253 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 LIMS3P0CW19 117 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 LIMS4P0CW20 117 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 PIPP12273 146 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 TRIM23P36406 574 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 SMSP52788 366 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 CDK10Q15131 360 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 MEDAGQ5VYS4 303 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 SLC27A4Q6P1M0 643 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 RD3Q7Z3Z2 195 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 GANCQ8TET4 914 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 SPRYD4Q8WW59 207 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 OR8D1Q8WZ84 308 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 WDR34Q96EX3 536 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 MCOLN1Q9GZU1 580 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 DDX31Q9H8H2 851 aaKnown RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 RNF121Q9H920 327 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 GALNT9Q9HCQ5 603 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 GIMAP4Q9NUV9 329 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 MRPS7Q9Y2R9 242 aaKnown RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 OBSL1O75147 1896 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 CENPVL1A0A0U1RR11 272 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 POLR1CO15160 346 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 GKN3PP0CG01 181 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 DDX5P17844 614 aaKnown RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 BCL6P41182 706 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 P2RY2P41231 377 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 SLC9A3P48764 834 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 CSNK1G2P78368 415 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 ZNF234Q14588 700 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 IKBIPQ70UQ0 350 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 SYT9Q86SS6 491 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 MORN4Q8NDC4 146 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 NEIL3Q8TAT5 605 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 POF1BQ8WVV4 589 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 SENP5Q96HI0 755 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 INSM2Q96T92 566 aaPredicted RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 BEX1Q9HBH7 125 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 DIMT1Q9UNQ2 313 aaKnown RBP8.57□□□□□ -1.04
MSH4-201ENST00000263187 ICKQ9UPZ9 632 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
MSH4-201ENST00000263187 A0A1W2PPV9 198 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms