RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OR6C4Q8NGE1 309 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 CCNL2Q96S94 520 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 DPCDQ9BVM2 203 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 ACTRT3Q9BYD9 372 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SYNPO2LQ9H987 977 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SLC39A1Q9NY26 324 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 KLHL9Q9P2J3 617 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 E7ESA3 106 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 EPHA1P21709 976 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 BMPR1AP36894 532 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MC3RP41968 323 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 CDKN2CP42773 168 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 RABIFP47224 123 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 FOXA1P55317 472 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 UBE2NP61088 152 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 LETMD1Q6P1Q0 360 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TRIM46Q7Z4K8 759 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MINDY1Q8N5J2 469 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 OR5D16Q8NGK9 328 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MAELQ96JY0 434 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 CPEB1Q9BZB8 566 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM9Q9P0T7 183 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TMPRSS11EQ9UL52 423 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 UBE2J1Q9Y385 318 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 C5P01031 1676 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 OPN1LWP04000 364 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 UCHL1P09936 223 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 P2RY2P41231 377 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 HNRNPKP61978 463 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 MFSD13AQ14CX5 517 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 GRHL2Q6ISB3 625 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 UGT2A3Q6UWM9 527 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 LIPIQ6XZB0 460 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 SCML4Q8N228 414 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 OR5AK2Q8NH90 309 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 FIBINQ8TAL6 211 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 PEX13Q92968 403 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 L3HYPDHQ96EM0 354 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 METTL2AQ96IZ6 378 aaKnown RBP11.48□□□□□ -0.57
COL8A1-201ENST00000261037 KLHL15Q96M94 604 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 ANKMY1Q9P2S6 941 aa11.48□□□□□ -0.57
COL8A1-201ENST00000261037 A8MVJ9 347 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 SLC1A7O00341 560 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 FRS3O43559 492 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 HTR3BO95264 441 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 CA3P07451 260 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ITGB8P26012 769 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 CNR2P34972 360 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 RCAN2Q14206 197 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 PPA1Q15181 289 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 TP53I3Q53FA7 332 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 C10orf62Q5T681 223 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MANEALQ5VSG8 457 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 UNC5DQ6UXZ4 953 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF852Q6ZMS4 543 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ARL14Q8N4G2 192 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MDGA1Q8NFP4 955 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MYH2Q9UKX2 1941 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 GJB3O75712 270 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 HMGCLP35914 325 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 CLCN2P51788 898 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 NCS1P62166 190 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 RGNQ15493 299 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 OR8J1Q8NGP2 316 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MSANTD3Q96H12 275 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 HERPUD2Q9BSE4 406 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ALOXE3Q9BYJ1 711 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 NMNAT1Q9HAN9 279 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 PRAMEF2O60811 474 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 BMP1P13497 986 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 NPR2P20594 1047 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 SCAPQ12770 1279 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MAMDC2Q7Z304 686 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ISCA2Q86U28 154 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 PELOQ9BRX2 385 aaKnown RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 C8orf33Q9H7E9 229 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 SETD1AO15047 1707 aaKnown RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ERCC1P07992 297 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 IL4RP24394 825 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 ART1P52961 327 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 FXYD4P59646 89 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 RCBTB1Q8NDN9 531 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 MAFIPQ8WZ33 124 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 LGALS12Q96DT0 336 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 OR5B2Q96R09 309 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 RBM24Q9BX46 236 aaKnown RBP11.47□□□□□ -0.57
COL8A1-201ENST00000261037 RGCCQ9H4X1 137 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 POT1Q9NUX5 634 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms