RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 SMARCD2Q92925 531 aa9.27□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC25A18Q9H1K4 315 aa9.27□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC28A3Q9HAS3 691 aa9.27□□□□□ -0.93
CTDSPL2-201ENST00000260327 DHDHQ9UQ10 334 aa9.27□□□□□ -0.93
CTDSPL2-201ENST00000260327 GXYLT2A0PJZ3 443 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TSPAN6O43657 245 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NFATC1O95644 943 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 APODP05090 189 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CYP17A1P05093 508 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 FBXO45P0C2W1 286 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF26P17031 533 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM115Q12893 351 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 IRAK1BP1Q5VVH5 260 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 BRAT1Q6PJG6 821 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ENTHD1Q8IYW4 607 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NATD1Q8N6N6 113 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR9A1PQ8NGU1 263 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RBPMSQ93062 196 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 FAM83CQ9BQN1 747 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 DCAF13Q9NV06 445 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CLEC4EQ9ULY5 219 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 LSM5Q9Y4Y9 91 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RPS10-NUDT3A0A1W2PQS6 291 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 AMY2BP19961 511 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GABRB3P28472 473 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ETV3P41162 512 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RPS5P46782 204 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RPS10P46783 165 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 MASP1P48740 699 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TPMTP51580 245 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 DOC2AQ14183 400 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PLEKHN1Q494U1 663 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RNASE10Q5GAN6 216 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 C22orf39Q6P5X5 142 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GATSQ8NAP1 163 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CIDECQ96AQ7 238 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF514Q96K75 400 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CMKLR1Q99788 373 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SORBS1Q9BX66 1292 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 AGR2O95994 175 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 FGF4P08620 206 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GNSP15586 552 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CAPZA1P52907 286 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SELPLGQ14242 412 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 EIF4HQ15056 248 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PDGFRLQ15198 375 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR4K5Q8NGD3 323 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 HIST1H2AAQ96QV6 131 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ORAI3Q9BRQ5 295 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GFOD1Q9NXC2 390 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SPO11Q9Y5K1 396 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NOX1Q9Y5S8 564 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ALPLP05186 524 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TIA1P31483 386 aaKnown RBP eCLIP9.26□□□□□ -0.934e-7■■■■□ 26.2
CTDSPL2-201ENST00000260327 SLC11A1P49279 550 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SORDQ00796 357 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 OPCMLQ14982 345 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 C1orf94Q6P1W5 598 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GPR135Q8IZ08 494 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SVBPQ8N300 66 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TEX26Q8N6G2 289 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 DCAF4L2Q8NA75 395 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF419Q96HQ0 510 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TEPSINQ96N21 525 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 FYTTD1Q96QD9 318 aaKnown RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 SULT4A1Q9BR01 284 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PINK1Q9BXM7 581 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CNIH4Q9P003 139 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRFN1Q9P244 771 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PCDHGB2Q9Y5G2 931 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 IGKV6-21A0A0C4DH24 114 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CLDN24A6NM45 220 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NPIPA5E9PKD4 350 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 I6L893 689 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TXNDC12O95881 172 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ADAP00813 363 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PTPN2P17706 415 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NDUFV2P19404 249 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CD9P21926 228 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PBX2P40425 430 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 OC90Q02509 493 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 GPR17Q13304 367 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF534Q76KX8 674 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 BBS10Q8TAM1 723 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 PHOSPHO1Q8TCT1 267 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 VRK1Q99986 396 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 CRB3Q9BUF7 120 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 IL21RQ9HBE5 538 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NOX3Q9HBY0 568 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 NPIPA1Q9UND3 350 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 RASD1Q9Y272 281 aa9.26□□□□□ -0.93
CTDSPL2-201ENST00000260327 IGKV6D-21A0A0A0MT36 114 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SCAMP2O15127 329 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 LATS1O95835 1130 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms