RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 METTL7BQ6UX53 244 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 DENND1CQ8IV53 801 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ARL14Q8N4G2 192 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 KLHDC1Q8N7A1 406 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SETD7Q8WTS6 366 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TFB1MQ8WVM0 346 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TRMOQ9BU70 441 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SAMD10Q9BYL1 202 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 MS4A7Q9GZW8 240 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CHODLQ9H9P2 273 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 ATG4BQ9Y4P1 393 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 NME6O75414 186 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CRHBPP24387 322 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 CMPK1P30085 196 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 GALNT2Q10471 571 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TAZQ16635 292 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 PARP15Q460N3 678 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 GGNBP1Q5YKI7 109 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 TAPT1Q6NXT6 567 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 STRADAQ7RTN6 431 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 COMMD2Q86X83 199 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 BRI3BPQ8WY22 251 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 MRGPRX4Q96LA9 322 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 FOXJ2Q9P0K8 574 aa6.43□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A1B0GW15 77 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 C7orf72A4D263 438 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM235A6NFC5 223 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ADM5C9JUS6 153 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MT-ND5P03915 603 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 HSD11B1P28845 292 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CSNK1DP48730 415 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC11A2P49281 568 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CLCNKAP51800 687 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CDK3Q00526 305 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SOX4Q06945 474 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TNFRSF9Q07011 255 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 OR2T2Q6IF00 324 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CHRDL2Q6WN34 429 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CAMKMTQ7Z624 323 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC47A2Q86VL8 602 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PRR11Q96HE9 360 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MS4A3Q96HJ5 214 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 DOK1Q99704 481 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MICU1Q9BPX6 476 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PCED1AQ9H1Q7 454 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 KLHL28Q9NXS3 571 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CLEC5AQ9NY25 188 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SPIN1Q9Y657 262 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NWD2Q9ULI1 1742 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 IGKV6D-41A0A0C4DH26 115 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TCRBV9S1A1TA0A576 114 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 C17orf102A2RUQ5 167 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MPTX1A8MV57 137 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SIGLEC5O15389 551 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MBTPS2O43462 519 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TRAF3IP2O43734 574 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TYROBPO43914 113 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 RAB36O95755 333 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC2A4P14672 509 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CHRNA4P43681 627 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NUTF2P61970 127 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 H3F3AP84243 136 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 DGKZQ13574 1117 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 RIN1Q13671 783 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SCARB2Q14108 478 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 STEAP1BQ6NZ63 245 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 TTLL10Q6ZVT0 673 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 GPR155Q7Z3F1 870 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 LRRC57Q8N9N7 239 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SUMF2Q8NBJ7 301 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM98AQ8NCA5 519 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 OR4K3Q96R72 315 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CST11Q9H112 138 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 SMURF2Q9HAU4 748 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF586Q9NXT0 402 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 STEAP1Q9UHE8 339 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 RPL36Q9Y3U8 105 aaKnown RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NFASCO94856 1347 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 BORCS7-ASMTA0A0B4J1R7 106 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MANSC4A6NHS7 340 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 ANXA2P2A6NMY6 339 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 YDJCA8MPS7 323 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PROSCO94903 275 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PMP2P02689 132 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 LAG3P18627 525 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 GABRR2P28476 465 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM187BQ17R55 369 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF19Q5SWL8 479 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 AADACL2Q6P093 401 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 CBARPQ8N350 705 aaPredicted RBP6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MCHR2Q969V1 340 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 C2orf88Q9BSF0 95 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 DDA1Q9BW61 102 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 HINT2Q9BX68 163 aa6.42□□□□□ -1.38
PDGFRA-201ENST00000257290 MIXL1Q9H2W2 232 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms