RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SNAPC5O75971 98 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR1D5P58170 312 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 NXPH1P58417 271 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 TLE3Q04726 772 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SEMA3BQ13214 749 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 TIGD6Q17RP2 521 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 FCRL6Q6DN72 434 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 NDUFAF7Q7L592 441 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 DPPA2Q7Z7J5 298 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 NAGSQ8N159 534 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 ANKK1Q8NFD2 765 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR5AK3PQ8NH89 298 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 MOCOSQ96EN8 888 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 TIMD4Q96H15 378 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 PIP5K1AQ99755 562 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 CHCHD6Q9BRQ6 235 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC17A4Q9Y2C5 497 aa12.68□□□□□ -0.38
PRPF38A-201ENST00000257181 TEX46H3BTG2 121 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 DNAJB6O75190 326 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CREG1O75629 220 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ADORA3P0DMS8 318 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ETS2P15036 469 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 F8A1P23610 371 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC9A3P48764 834 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CDKN2DP55273 166 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 FOLH1Q04609 750 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 DEFB110Q30KQ9 67 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 MMP21Q8N119 569 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ENY2Q9NPA8 101 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 TAS2R10Q9NYW0 307 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 TESQ9UGI8 421 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 H3BNX3 289 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CERS1P27544 350 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CTSCP53634 463 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF252P-AS1Q0IIN9 211 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF528Q3MIS6 628 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PRAMEF8Q5VWM4 474 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PRAMEF7Q5VXH5 474 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF227Q86WZ6 799 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ETFBKMTQ8IXQ9 262 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZCCHC7Q8N3Z6 543 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 OR4D9Q8NGE8 314 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CCDC74BQ96LY2 380 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 USB1Q9BQ65 265 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 MROQ9BYG7 248 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC6A16Q9GZN6 736 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZBTB26Q9HCK0 441 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 YARS2Q9Y2Z4 477 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CSNK1A1P48729 337 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 DNASE1L3Q13609 305 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PDE7AQ13946 482 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 AP1ARQ63HQ0 302 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 GLT8D1Q68CQ7 371 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 METTL4Q8N3J2 472 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 POC5Q8NA72 575 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PGAM5Q96HS1 289 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 MNTQ99583 582 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 CXorf49A8MYA2 514 aaPredicted RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 TSPAN9O75954 239 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 IL12AP29459 219 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 POLR2HP52434 150 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 FAM53BQ14153 422 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PCLAFQ15004 111 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PIP5KL1Q5T9C9 394 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 RSBN1Q5VWQ0 802 aaPredicted RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 RPS19BP1Q86WX3 136 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 THOC3Q96J01 351 aaKnown RBP12.67□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF749O43361 778 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 MRPL33O75394 65 aaKnown RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 JRKO75564 520 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 GSTT2P0CG29 244 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 HTR1EP28566 365 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 MED22Q15528 200 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC18B1Q6NT16 456 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 TMEM102Q8N9M5 508 aaPredicted RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 S100A14Q9HCY8 104 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 TVP23BQ9NYZ1 205 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ZCWPW2A0A1B0GU75 182 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 MAP2K6P52564 334 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC26A5P58743 744 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 CARTPTQ16568 116 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 SPANXN4Q5MJ08 99 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms