RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 HRKO00198 91 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 ASNA1O43681 348 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 AGXTP21549 392 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 CRHBPP24387 322 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 MAGEA8P43361 318 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 KCNJ5P48544 419 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 PDX1P52945 283 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 DAB2P98082 770 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 C1orf189Q5VU69 101 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 KMT5CQ86Y97 462 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 RBM45Q8IUH3 476 aaKnown RBP17.63■□□□□ 0.41
TRIM47-201ENST00000254816 LACC1Q8IV20 430 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 CHDHQ8NE62 594 aaPredicted RBP17.63■□□□□ 0.41
TRIM47-201ENST00000254816 OR4D11Q8NGI4 311 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 APOBEC4Q8WW27 367 aaKnown RBP17.63■□□□□ 0.41
TRIM47-201ENST00000254816 COG8Q96MW5 612 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 SLC38A1Q9H2H9 487 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 BCL2L10Q9HD36 194 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 RHCGQ9UBD6 479 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 RALGAPA1Q6GYQ0 2036 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 A0A087WV62 115 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 PLOD3O60568 738 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 FCMRO60667 390 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 SERPINB7O75635 380 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 ZIC2O95409 532 aaPredicted RBP17.63■□□□□ 0.41
TRIM47-201ENST00000254816 FPR1P21462 350 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 SPIBQ01892 262 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 CD47Q08722 323 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 DUSP8Q13202 625 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 GANABQ14697 944 aaKnown RBP17.63■□□□□ 0.41
TRIM47-201ENST00000254816 ATAD3BQ5T9A4 648 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 MLIPQ5VWP3 458 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF675Q8TD23 568 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 PROX1Q92786 737 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 CTHRC1Q96CG8 243 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 NDC1Q9BTX1 674 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 NECTIN3Q9NQS3 549 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 GIN1Q9NXP7 522 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 SERTAD3Q9UJW9 196 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF451Q9Y4E5 1061 aa17.63■□□□□ 0.41
TRIM47-201ENST00000254816 NUP210LQ5VU65 1888 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 ASCC3Q8N3C0 2202 aaKnown RBP17.62■□□□□ 0.41
TRIM47-201ENST00000254816 LOC100130705A0A1B0GUX0 176 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 CLDN4O14493 209 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 CBX7O95931 251 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 SYPP08247 313 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 CYP4B1P13584 511 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 MPLP40238 635 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 STT3AP46977 705 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 ARHGDIAP52565 204 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 EMP3P54852 163 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 CDH12P55289 794 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 IL1RL1Q01638 556 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 CCNJQ5T5M9 372 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 BROXQ5VW32 411 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 KRT73Q86Y46 540 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 VWA5B2Q8N398 1253 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 OR52R1Q8NGF1 315 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 PIK3R3Q92569 461 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 RBM18Q96H35 190 aaKnown RBP17.62■□□□□ 0.41
TRIM47-201ENST00000254816 ZNF354BQ96LW1 612 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 KMT2EQ8IZD2 1858 aa17.62■□□□□ 0.41
TRIM47-201ENST00000254816 A0A0G2JPF8 293 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 IGHV5-10-1A0A0J9YXX1 117 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 A8MVJ9 347 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HNRNPCL2B2RXH8 293 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HNRNPCL3B7ZW38 293 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 FOXD2O60548 495 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-201ENST00000254816 IFNW1P05000 195 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HNRNPCL4P0DMR1 293 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 DCKP27707 260 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 GCGRP47871 477 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 DAPP51397 102 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HPCAP84074 193 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 GNA13Q14344 377 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 C6orf141Q5SZD1 244 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 LAIR2Q6ISS4 152 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 CYP4Z1Q86W10 505 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 GALNT12Q8IXK2 581 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 RIT1Q92963 219 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 C3orf18Q9UK00 162 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 MKLN1Q9UL63 735 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 LYVE1Q9Y5Y7 322 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 DUXAA6NLW8 204 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 TNFRSF11BO00300 401 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 EPPINO95925 133 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 SSTR4P31391 388 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 EPS8Q12929 822 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 SQSTM1Q13501 440 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 PROX2Q3B8N5 592 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 RBM48Q5RL73 367 aaKnown RBP17.61■□□□□ 0.41
TRIM47-201ENST00000254816 XAF1Q6GPH4 301 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HEPHL1Q6MZM0 1159 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 ARHGAP22Q7Z5H3 698 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 ADAMTS18Q8TE60 1221 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 HDAC2Q92769 488 aaKnown RBP17.61■□□□□ 0.41
TRIM47-201ENST00000254816 ATOH1Q92858 354 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-201ENST00000254816 NAT6Q93015 286 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 CCDC74BQ96LY2 380 aa17.61■□□□□ 0.41
TRIM47-201ENST00000254816 DGAT2Q96PD7 388 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms