RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 HOXC4P09017 264 aaPredicted RBP17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 HNRNPCL4P0DMR1 293 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 CKMT1AP12532 417 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 UGT2B7P16662 529 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 TSFMP43897 325 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 SMIM11AP58511 58 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 ZP2Q05996 745 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 TSTQ16762 297 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 ZNF311Q5JNZ3 666 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 CASP12Q6UXS9 341 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 C11orf74Q86VG3 221 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 MCFD2Q8NI22 146 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 PRRC1Q96M27 445 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 OR2A5Q96R48 311 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 SPATA5L1Q9BVQ7 753 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 LOC105369274A0A096LPK9 316 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 LOC102723532A0A0G2JNH3 316 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 OR6C74A6NCV1 312 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PRKYO43930 277 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 IGLV3-19P01714 112 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 NDUFS1P28331 727 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PDX1P52945 283 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 STARD6P59095 220 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SRP54P61011 504 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 RPS3AP61247 264 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SNRPGP62308 76 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 ID2Q02363 134 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 RGS1Q08116 209 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 CEBPEQ15744 281 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 FCRL6Q6DN72 434 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 OR4N4Q8N0Y3 316 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SHDQ96IW2 340 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 LYARQ9NX58 379 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 NDOR1Q9UHB4 597 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 NTNG1Q9Y2I2 539 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 STK25O00506 426 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 DSCR3O14972 297 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC35G6P0C7Q6 338 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PVRP15151 417 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 ANXA11P50995 505 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 ARFIP1P53367 373 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 RUNX2Q13950 521 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 ZNF367Q7RTV3 350 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC16A11Q8NCK7 471 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 MOAP1Q96BY2 351 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC35A4Q96G79 324 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 CRELD1Q96HD1 420 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 NECAB3Q96P71 396 aaPredicted RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 MGLLQ99685 303 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PINK1Q9BXM7 581 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PLA2G12AQ9BZM1 189 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 TCEAL2Q9H3H9 227 aaPredicted RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 DSN1Q9H410 356 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 C3orf14Q9HBI5 128 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 WSB2Q9NYS7 404 aaPredicted RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PCOLCE2Q9UKZ9 415 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 DOLKQ9UPQ8 538 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 MRPS2Q9Y399 296 aaKnown RBP17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 PCDHGA3Q9Y5H0 932 aa17.52■□□□□ 0.4
PDLIM4-201ENST00000253754 CPSF4LA6NMK7 179 aaKnown RBP17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 SLITRK5O94991 958 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 CPN2P22792 545 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 AVPR1BP47901 424 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 TNFRSF17Q02223 184 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 TGM3Q08188 693 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF542PQ5EBM4 170 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 Q6ZSR6 202 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 FAM92BQ6ZTR7 304 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 PRSS41Q7RTY9 318 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 C16orf62Q7Z3J2 963 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 S100ZQ8WXG8 99 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 Q96MT0 163 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 EGLN3Q9H6Z9 239 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 KCMF1Q9P0J7 381 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 MKLN1Q9UL63 735 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 TLX2O43763 284 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 APBB3O95704 486 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ALPPP05187 535 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 TRHRP34981 398 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 UGT2B10P36537 528 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ZNF91Q05481 1191 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 GNA13Q14344 377 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 SSX1Q16384 188 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 KIAA0895LQ68EN5 471 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ACSM5Q6NUN0 579 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 KIF18BQ86Y91 864 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 NT5CQ8TCD5 201 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 C6orf62Q9GZU0 229 aaPredicted RBP17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 EVA1BQ9NVM1 165 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 TBCCD1Q9NVR7 557 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ACTR10Q9NZ32 417 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 ANKMY1Q9P2S6 941 aa17.51■□□□□ 0.39
PDLIM4-201ENST00000253754 A0A087WUU8 490 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 METTL15A6NJ78 407 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 CASC3O15234 703 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 ZSCAN9O15535 394 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 EIF2S1P05198 315 aaKnown RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 CELA2BP08218 269 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 PTNP21246 168 aa17.5■□□□□ 0.39
PDLIM4-201ENST00000253754 SOX3P41225 446 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms