RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PPP1CAP62136 330 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 RGS1Q08116 209 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 C1orf61Q13536 156 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 HTR4Q13639 388 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 MLIPQ5VWP3 458 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 SLC46A3Q7Z3Q1 461 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 IFT52Q9Y366 437 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 HEBP2Q9Y5Z4 205 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 SYNDIG1LA6NDD5 238 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 SLC35G6P0C7Q6 338 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 UGT2B7P16662 529 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 RGS6P49758 472 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 PDX1P52945 283 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 MLC1Q15049 377 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 ALG11Q2TAA5 492 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 TMEM184AQ6ZMB5 413 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 RASSF5Q8WWW0 418 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 FCGR1BQ92637 280 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 RIPOR3Q96MK2 946 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 PLA2G12AQ9BZM1 189 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 TP63Q9H3D4 680 aaPredicted RBP14.79□□□□□ -0.04
LRFN1-201ENST00000248668 ANKMY1Q9P2S6 941 aa14.79□□□□□ -0.04
LRFN1-201ENST00000248668 WWP2O00308 870 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 EMC8O43402 210 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 PRKYO43930 277 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 RFX3P48380 749 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 SRP54P61011 504 aaKnown RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 TGM3Q08188 693 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 GINS1Q14691 196 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 Q6ZSR6 202 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 RFPL4BQ6ZWI9 263 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 NRROSQ86YC3 692 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 OR5T3Q8NGG3 340 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 OR6Q1Q8NGQ2 317 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 SUN5Q8TC36 379 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 HTRA1Q92743 480 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 CDS1Q92903 461 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 MGLLQ99685 303 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 MROQ9BYG7 248 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 SLC38A1Q9H2H9 487 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 DSN1Q9H410 356 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 NDRG2Q9UN36 371 aaKnown RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 TAF4O00268 1085 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ZIC2O95409 532 aaPredicted RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 LGI1O95970 557 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 CH25HO95992 272 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 HNRNPA2B1P22626 353 aaKnown RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 SRSF5Q13243 272 aaKnown RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 RUNX2Q13950 521 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ACSM5Q6NUN0 579 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 BHLHB9Q6PI77 547 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ZNF438Q7Z4V0 828 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 SRFBP1Q8NEF9 429 aaKnown RBP14.78□□□□□ -0.04
LRFN1-201ENST00000248668 OR13H1Q8NG92 308 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 OR56A1Q8NGH5 318 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 BBS10Q8TAM1 723 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ADAMTS15Q8TE58 950 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ZNF681Q96N22 645 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 C3orf14Q9HBI5 128 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ADAP2Q9NPF8 381 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 ZNF229Q9UJW7 825 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 DSPPQ9NZW4 1301 aa14.78□□□□□ -0.04
LRFN1-201ENST00000248668 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.77□□□□□ -0.04
LRFN1-201ENST00000248668 RPLP0P05388 317 aaKnown RBP14.77□□□□□ -0.04
LRFN1-201ENST00000248668 ILKQ13418 452 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 DEFB110Q30KQ9 67 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 OR2A14Q96R47 310 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 ENOPH1Q9UHY7 261 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 CD207Q9UJ71 328 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 NPIPA5A0A0B4J1W7 369 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 CENPVL1A0A0U1RR11 272 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 LRRC72A6NJI9 287 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 A8MVJ9 347 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 NPIPA7E9PJI5 369 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 NPIPA8P0DM63 369 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 TYRP1P17643 537 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 SLC13A2Q13183 592 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 PLAG1Q6DJT9 500 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 FIGLAQ6QHK4 219 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 SHFQ7M4L6 423 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 FANCMQ8IYD8 2048 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 MFSD4AQ8N468 514 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 SLC35A4Q96G79 324 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 SLC6A18Q96N87 628 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 COQ7Q99807 217 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 TSSK6Q9BXA6 273 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 MIR1-1HGQ9H1L0 117 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 KLF15Q9UIH9 416 aa14.77□□□□□ -0.04
LRFN1-201ENST00000248668 EFCAB10A6NFE3 127 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 ALPPP05187 535 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 TRHRP34981 398 aaPredicted RBP14.77□□□□□ -0.05
LRFN1-201ENST00000248668 LSSP48449 732 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 TRMT12Q53H54 448 aaKnown RBP14.77□□□□□ -0.05
LRFN1-201ENST00000248668 SCARF2Q96GP6 870 aaPredicted RBP14.77□□□□□ -0.05
LRFN1-201ENST00000248668 FAM46AQ96IP4 442 aaKnown RBP14.77□□□□□ -0.05
LRFN1-201ENST00000248668 RBCK1Q9BYM8 510 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 POLMQ9NP87 494 aaPredicted RBP14.77□□□□□ -0.05
LRFN1-201ENST00000248668 ZSCAN32Q9NX65 697 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms