RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 SHC1P29353 583 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 SOX9P48436 509 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 FABP5Q01469 135 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 KIAA0040Q15053 153 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 DUSP6Q16828 381 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 SERPINA13PQ6UXR4 307 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 GJD3Q8N144 294 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 ESX1Q8N693 406 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 GNPDA2Q8TDQ7 276 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 FCAMRQ8WWV6 532 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 TIFAQ96CG3 184 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 WDFY2Q96P53 400 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 CLSTN3Q9BQT9 956 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 TMEM175Q9BSA9 504 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 NXF2Q9GZY0 626 aaKnown RBP9.24□□□□□ -0.93
TRIM23-201ENST00000231524 DDX31Q9H8H2 851 aaKnown RBP9.24□□□□□ -0.93
TRIM23-201ENST00000231524 ASIC5Q9NY37 505 aa9.24□□□□□ -0.93
TRIM23-201ENST00000231524 DRGXA6NNA5 263 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ZNF879B4DU55 563 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 OR1F1O43749 312 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FZD7O75084 574 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ZNF821O75541 412 aaPredicted RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 IFNGP01579 166 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TPOP07202 933 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 HSD3B1P14060 373 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 GNSP15586 552 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 HSD3B2P26439 372 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 MAP2K6P52564 334 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RING1Q06587 406 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TRAM2Q15035 370 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 METTL11BQ5VVY1 283 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 CD276Q5ZPR3 534 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 PRSS55Q6UWB4 352 aaPredicted RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ZNF280BQ86YH2 543 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 C16orf78Q8WTQ4 265 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SUV39H2Q9H5I1 410 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TCF7L1Q9HCS4 588 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SPG21Q9NZD8 308 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 CSN2P05814 226 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 PIPP12273 146 aaPredicted RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SLC1A3P43003 542 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 EPHB3P54753 998 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SNRPGP62308 76 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TAF13Q15543 124 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 C3orf38Q5JPI3 329 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 METTL2BQ6P1Q9 378 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 Q6ZVL8 140 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ABI3BPQ7Z7G0 1075 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FAM124AQ86V42 546 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RBM45Q8IUH3 476 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 LINC01465Q8N7H1 131 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FBXW5Q969U6 566 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 S100A16Q96FQ6 103 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TRAF4Q9BUZ4 470 aaPredicted RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 EXO5Q9H790 373 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FBXW2Q9UKT8 454 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 EXO1Q9UQ84 846 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RCE1Q9Y256 329 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 A0A0U1RQF3 1178 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SHOXO15266 292 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 LRRTM2O43300 516 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 PRAMEF12O95522 483 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 C1QCP02747 245 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RPLP2P05387 115 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ELFN1P0C7U0 828 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 GABRB1P18505 474 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 EDNRAP25101 427 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 GPR1P46091 355 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 XCR1P46094 333 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 KHKP50053 298 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ERVK-21P61565 698 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 MC2RQ01718 297 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SYT14P1Q58G82 188 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FAM220AQ7Z4H9 259 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 KRT77Q7Z794 578 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TMIEQ8NEW7 156 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 OR2T33Q8NG76 320 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TBC1D20Q96BZ9 403 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TRMT61AQ96FX7 289 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SCLYQ96I15 445 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 FCRL1Q96LA6 429 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RIOK2Q9BVS4 552 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 C1QTNF7Q9BXJ2 289 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 RHBGQ9H310 441 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 WDR26Q9H7D7 661 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ACTR10Q9NZ32 417 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 IKZF2Q9UKS7 526 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 AK6Q9Y3D8 172 aaKnown RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 NFYAP23511 347 aaPredicted RBP9.23□□□□□ -0.93
TRIM23-201ENST00000231524 SP140Q13342 867 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 TNK1Q13470 666 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 MLIPQ5VWP3 458 aa9.23□□□□□ -0.93
TRIM23-201ENST00000231524 MS4A15Q8N5U1 240 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms