RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MTNR1AP48039 350 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 TSPAN31Q12999 210 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 CAMK1Q14012 370 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 PRICKLE2Q7Z3G6 844 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 CCDC116Q8IYX3 515 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 GDPD1Q8N9F7 314 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
LTBR-201ENST00000228918 UFD1Q92890 307 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 C1GALT1C1Q96EU7 318 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 DIRAS2Q96HU8 199 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 PHOX2BQ99453 314 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 SLC22A4Q9H015 551 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 OSGEPL1Q9H4B0 414 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 SLC6A20Q9NP91 592 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 PRDM7Q9NQW5 492 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 CNIH4Q9P003 139 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 OR1A2Q9Y585 309 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 LINC00854A0A1B0GVQ3 168 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 A0A1W2PS29 197 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 MEIOCA2RUB1 952 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 FABP12A6NFH5 140 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 FRS3O43559 492 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 LIMS3P0CW19 117 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 LIMS4P0CW20 117 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 GABRA5P31644 462 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 IFNGR2P38484 337 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 TRAM2Q15035 370 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 ZNF311Q5JNZ3 666 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 ABHD17CQ6PCB6 329 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 RASSF6Q6ZTQ3 369 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 CACUL1Q86Y37 369 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 ACOT4Q8N9L9 421 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 OR2L8Q8NGY9 312 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 NR4A3Q92570 626 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 DIO2Q92813 273 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 SLC38A2Q96QD8 506 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 OR7D2Q96RA2 312 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 TM9SF2Q99805 663 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 SLC38A1Q9H2H9 487 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 WDR26Q9H7D7 661 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 MARCH7Q9H992 704 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 IMP3Q9NV31 184 aaKnown RBP15.28■□□□□ 0.04
LTBR-201ENST00000228918 TOR4AQ9NXH8 423 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
LTBR-201ENST00000228918 ENTPD4Q9Y227 616 aa15.28■□□□□ 0.04
LTBR-201ENST00000228918 GPR55Q9Y2T6 319 aaPredicted RBP15.28■□□□□ 0.04
LTBR-201ENST00000228918 MDC1Q14676 2089 aaKnown RBP15.28■□□□□ 0.04
LTBR-201ENST00000228918 GPR89AB7ZAQ6 455 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 LATO43561 262 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 GPR89BP0CG08 455 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 TRAPPC2P0DI81 140 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 TRAPPC2BP0DI82 140 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 C8orf89P0DMQ9 161 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 CHRNB1P11230 501 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 ATP5A1P25705 553 aaKnown RBP15.27■□□□□ 0.04
LTBR-201ENST00000228918 CD79BP40259 229 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 FABP5Q01469 135 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 MAP4K2Q12851 820 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 CRTC2Q53ET0 693 aaPredicted RBP15.27■□□□□ 0.04
LTBR-201ENST00000228918 FAM78AQ5JUQ0 283 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 CD200R1LQ6Q8B3 271 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 ZNF730Q6ZMV8 503 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 PRR23CQ6ZRP0 262 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 SHFQ7M4L6 423 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 GATAD2AQ86YP4 633 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 ZNF485Q8NCK3 441 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 KIAA1143Q96AT1 154 aaPredicted RBP15.27■□□□□ 0.04
LTBR-201ENST00000228918 FAM46AQ96IP4 442 aaKnown RBP15.27■□□□□ 0.04
LTBR-201ENST00000228918 SNX18Q96RF0 628 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 MMP28Q9H239 520 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 MRPS30Q9NP92 439 aaKnown RBP15.27■□□□□ 0.04
LTBR-201ENST00000228918 SEMA4GQ9NTN9 838 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 CES1P1Q9UKY3 287 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 SNX7Q9UNH6 387 aa15.27■□□□□ 0.04
LTBR-201ENST00000228918 SMIM30A4D0T7 59 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 CPSF4LA6NMK7 179 aaKnown RBP15.27■□□□□ 0.03
LTBR-201ENST00000228918 POLR1CO15160 346 aaPredicted RBP15.27■□□□□ 0.03
LTBR-201ENST00000228918 TMCC2O75069 709 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 PCDH8O95206 1070 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 NTN1O95631 604 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 ALPPP05187 535 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 FGF9P31371 208 aaPredicted RBP15.27■□□□□ 0.03
LTBR-201ENST00000228918 PRR5P85299 388 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 CHRNEQ04844 493 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 ZNF628Q5EBL2 1059 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 PDZK1Q5T2W1 519 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 AGBL4Q5VU57 503 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 C18orf63Q68DL7 685 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 SLC48A1Q6P1K1 146 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 SPRED2Q7Z698 418 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 C11orf74Q86VG3 221 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 VRK2Q86Y07 508 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 GJD3Q8N144 294 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 OR52P1PQ8NH57 321 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 AP3S1Q92572 193 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 KLK6Q92876 244 aa15.27■□□□□ 0.03
LTBR-201ENST00000228918 PRRG3Q9BZD7 231 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms