RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PDE7AQ13946 482 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 HYAL4Q2M3T9 481 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 ZNF791Q3KP31 576 aaPredicted RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 PDCD4Q53EL6 469 aaKnown RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 METTL21CQ5VZV1 264 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 TMEM211Q6ICI0 200 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 DGAT2L6Q6ZPD8 337 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 GALNT12Q8IXK2 581 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 C9orf40Q8IXQ3 194 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 MIER2Q8N344 545 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 FAM109AQ8N4B1 249 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 ACBD4Q8NC06 268 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 GLB1L3Q8NCI6 653 aaPredicted RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 VPS37AQ8NEZ2 397 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 RFWD2Q8NHY2 731 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 ZBED6CLQ96FA7 236 aaPredicted RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 SPOCK3Q9BQ16 436 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 EBF4Q9BQW3 602 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 TMEM120AQ9BXJ8 343 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 FAM107BQ9H098 131 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 RABEP2Q9H5N1 569 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 IL1RL2Q9HB29 575 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 RYDENQ9NUL5 291 aaKnown RBP16.58■□□□□ 0.24
PFN1-201ENST00000225655 ATP6V1HQ9UI12 483 aa16.58■□□□□ 0.24
PFN1-201ENST00000225655 SLITRK5O94991 958 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 IGHG3P01860 377 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 P04436 131 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 NR0B1P51843 470 aaKnown RBP16.57■□□□□ 0.24
PFN1-201ENST00000225655 NCBP2P52298 156 aaKnown RBP eCLIP16.57■□□□□ 0.246e-8■□□□□ 11.2
PFN1-201ENST00000225655 SPRED3Q2MJR0 410 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 EMC4Q5J8M3 183 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 ZNF295-AS1Q8N0V1 137 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 BRINP2Q9C0B6 783 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 SH2D2AQ9NP31 389 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 ZIM2Q9NZV7 527 aa16.57■□□□□ 0.24
PFN1-201ENST00000225655 PHF3Q92576 2039 aaKnown RBP16.57■□□□□ 0.24
PFN1-201ENST00000225655 OR14I1A6ND48 311 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 WASHC1A8K0Z3 465 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 HRKO00198 91 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 SLC22A3O75751 556 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 NADKO95544 446 aaPredicted RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 ALDOCP09972 364 aaKnown RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 CCL3P10147 92 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 NCF2P19878 526 aaPredicted RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 ELAVL4P26378 380 aaKnown RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 SSTR2P30874 369 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 FOXO1Q12778 655 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 PGS1Q32NB8 556 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 SPATA21Q7Z572 469 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 TMEM251Q8N6I4 163 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 RND1Q92730 232 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 UCN3Q969E3 161 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 TESCQ96BS2 214 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 ERP27Q96DN0 273 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 CNRIP1Q96F85 164 aaPredicted RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 LURAP1Q96LR2 239 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 CNPPD1Q9BV87 410 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 ENKD1Q9H0I2 346 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 SDR39U1Q9NRG7 319 aaPredicted RBP16.56■□□□□ 0.24
PFN1-201ENST00000225655 GPR45Q9Y5Y3 372 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 PDZD2O15018 2839 aa16.56■□□□□ 0.24
PFN1-201ENST00000225655 A0A1B0GVC2 190 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 MYO1GB0I1T2 1018 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 BCAS2O75934 225 aaPredicted RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 GPC1P35052 558 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 MAGEA5P43359 124 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 DNASE1L1P49184 302 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ATP4BP51164 291 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 SEC24CP53992 1094 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 MANFP55145 182 aaKnown RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 NME5P56597 212 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 LRRC74AQ0VAA2 488 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 SQLEQ14534 574 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ZNF267Q14586 743 aaPredicted RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ANXA8L1Q5VT79 327 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 SLC22A10Q63ZE4 541 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 TMEM198Q66K66 360 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ANKRD26P1Q6NSI1 321 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 LYPD8Q6UX82 237 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 CAMKMTQ7Z624 323 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 CCDC116Q8IYX3 515 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 VWA5B2Q8N398 1253 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 KRTCAP2Q8N6L1 136 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 OR7A2PQ8NGA2 310 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 PAQR8Q8TEZ7 354 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ASB5Q8WWX0 329 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 SPACA9Q96E40 222 aaPredicted RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 MARK4Q96L34 752 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ZNF681Q96N22 645 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 TREX2Q9BQ50 279 aaPredicted RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 DUSP26Q9BV47 211 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 CXorf21Q9HAI6 301 aa16.55■□□□□ 0.24
PFN1-201ENST00000225655 ACSS1Q9NUB1 689 aaPredicted RBP16.55■□□□□ 0.24
PFN1-201ENST00000225655 TMEM45AQ9NWC5 275 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms