RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ABHD17CQ6PCB6 329 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ZC3H14Q6PJT7 736 aaKnown RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 SETD9Q8NE22 299 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 OR2L8Q8NGY9 312 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 INTS12Q96CB8 462 aaKnown RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 WDR92Q96MX6 357 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 TIMM29Q9BSF4 260 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 NMNAT1Q9HAN9 279 aaPredicted RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 MKLN1Q9UL63 735 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ENTPD4Q9Y227 616 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ARID1BQ8NFD5 2236 aaPredicted RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 LOC100506127A0A0U1RQW1 187 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 P2RX6O15547 441 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 RECKO95980 971 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ERGP11308 486 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 GABRG2P18507 467 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 AVPR1BP47901 424 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 GALK2Q01415 458 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 EEF1A2Q05639 463 aaKnown RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 NFATC3Q12968 1075 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 FADDQ13158 208 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ALG11Q2TAA5 492 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 ZNF704Q6ZNC4 412 aaPredicted RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 TAF8Q7Z7C8 310 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 MAML2Q8IZL2 1156 aaPredicted RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 OR5H6Q8NGV6 325 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 NDNFQ8TB73 568 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 FAM3CQ92520 227 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 QRFPRQ96P65 431 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 COPS4Q9BT78 406 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 CDADC1Q9BWV3 514 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 MVB12BQ9H7P6 319 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 PRDM7Q9NQW5 492 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 TMEM5Q9Y2B1 443 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 COLEC10Q9Y6Z7 277 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 UNC13CQ8NB66 2214 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 NPIPA5A0A0B4J1W7 369 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 B4DGG1 531 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 NPIPA7E9PJI5 369 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 HCRTR1O43613 425 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 PRKNO60260 465 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 JRKO75564 520 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CCNB2O95067 398 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 NPIPA8P0DM63 369 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 C21orf58P58505 322 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 SRP54P61011 504 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 MICAQ29983 383 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ATAD3BQ5T9A4 648 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 METTL27Q8N6F8 245 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 FAR1Q8WVX9 515 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 DNAJC27Q9NZQ0 273 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 NDRG4Q9ULP0 352 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 EDARQ9UNE0 448 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CLCA2Q9UQC9 943 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ENPP4Q9Y6X5 453 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CEP192Q8TEP8 1941 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 A0A0A6YYD5 115 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 C12orf71A8MTZ7 269 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ZNF99A8MXY4 864 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 RGS10O43665 173 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 IDH3BO43837 385 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 FCMRO60667 390 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 BCAS1O75363 584 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 PDGFBP01127 241 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 GSTM2P28161 218 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CD6P30203 668 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TARDBPQ13148 414 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP11-201ENST00000218348 MAPK11Q15759 364 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TSPYL5Q86VY4 417 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 FAM46DQ8NEK8 389 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 NEURL3Q96EH8 262 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TOE1Q96GM8 510 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 FAIM2Q9BWQ8 316 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ALOXE3Q9BYJ1 711 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 MIR1-1HGQ9H1L0 117 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 RNF167Q9H6Y7 350 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ADAP2Q9NPF8 381 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ZC4H2Q9NQZ6 224 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 MAPRE3Q9UPY8 281 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 PADI2Q9Y2J8 665 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TPRKBQ9Y3C4 175 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TP53BP1Q12888 1972 aaPredicted RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CLEC3AO75596 197 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 IFNA14P01570 189 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CHRM4P08173 479 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 HNRNPA2B1P22626 353 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 CNR2P34972 360 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 NFATC4Q14934 902 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 PTGES3Q15185 160 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 SAXO2Q658L1 398 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms