RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 SLC13A4Q9UKG4 626 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 LIPT1Q9Y234 373 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 GPR52Q9Y2T5 361 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 ASB4Q9Y574 426 aa12.5□□□□□ -0.41
SRP54-201ENST00000216774 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
SRP54-201ENST00000216774 CASKO14936 926 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 ERAL1O75616 437 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 TIMP1P01033 207 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 HLA-DPB1P04440 258 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 PCCBP05166 539 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 CHRM5P08912 532 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 ITGB8P26012 769 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 CDH11P55287 796 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RIN1Q13671 783 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 ZNF234Q14588 700 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 MRM1Q6IN84 353 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 PRICKLE2Q7Z3G6 844 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 HMGN2P46Q86SG4 172 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 OR2A1Q8NGT9 310 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 CHFRQ96EP1 664 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 CNRIP1Q96F85 164 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 YIPF4Q9BSR8 244 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 SLA2Q9H6Q3 261 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 PPP1R3EQ9H7J1 279 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 ENTPD4Q9Y227 616 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 PCDHGB7Q9Y5F8 929 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 A0A0B4J293 547 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 A0A1W2PR48 441 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 GLOD5A6NK44 160 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 WASHC1A8K0Z3 465 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 AKAP8O43823 692 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 ACRP10323 421 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 SLC2A2P11168 524 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 FPR3P25089 353 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 STAT5AP42229 794 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 OMPP47874 163 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RAB28P51157 221 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 DMPKQ09013 629 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 AADACL4Q5VUY2 407 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 TRIQKQ629K1 86 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 MZT2BQ6NZ67 158 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 WASH2PQ6VEQ5 465 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RRM2BQ7LG56 351 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 C19orf18Q8NEA5 215 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 MS4A6EQ96DS6 147 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RNF31Q96EP0 1072 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 FERD3LQ96RJ6 166 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 TMEM246Q9BRR3 403 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 TTYH2Q9BSA4 534 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RAB11FIP5Q9BXF6 653 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 SLC38A1Q9H2H9 487 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 PAQR5Q9NXK6 330 aaPredicted RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 NUFIP1Q9UHK0 495 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 CLCA2Q9UQC9 943 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 POLHQ9Y253 713 aa12.49□□□□□ -0.41
SRP54-201ENST00000216774 EXOGQ9Y2C4 368 aaKnown RBP12.49□□□□□ -0.41
SRP54-201ENST00000216774 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PGRMC2O15173 223 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SURF4O15260 269 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 EMC8O43402 210 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PRKRAO75569 313 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 GALP22466 123 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 BCL6P41182 706 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MAP2K3P46734 347 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TGM3Q08188 693 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 DECR1Q16698 335 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TMEM107Q6UX40 140 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 Q8N402 240 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 OR52N1Q8NH53 320 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 C16orf58Q96GQ5 468 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 FAM46AQ96IP4 442 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 OR7D2Q96RA2 312 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 JAM3Q9BX67 310 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 QRSL1Q9H0R6 528 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PRDM7Q9NQW5 492 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 ASB6Q9NWX5 421 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CNIH4Q9P003 139 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 COMMD3Q9UBI1 195 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms