RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM246Q9BRR3 403 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 C1QTNF2Q9BXJ5 285 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 RANGRFQ9HD47 186 aaPredicted RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 HBQ1P09105 142 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ATP5A1P25705 553 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 XKP51811 444 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ID2Q02363 134 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 DBPQ10586 325 aaPredicted RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 MAP4K2Q12851 820 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 HNRNPA0Q13151 305 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 KRR1Q13601 381 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 ELOAQ14241 798 aaKnown RBP12.35□□□□□ -0.43
CTNS-201ENST00000046640 ZNF79Q15937 498 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ANKRD54Q6NXT1 300 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 ABHD17CQ6PCB6 329 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 IQCHQ86VS3 1027 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 SFTPA2Q8IWL1 248 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 OR10G6Q8NH81 332 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 SUN3Q8TAQ9 357 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 DIRAS2Q96HU8 199 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 GPA33Q99795 319 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 MAPKAP1Q9BPZ7 522 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 TSSK6Q9BXA6 273 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 REV1Q9UBZ9 1251 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 NTNG1Q9Y2I2 539 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 COL4A3Q01955 1670 aa12.35□□□□□ -0.43
CTNS-201ENST00000046640 MEIOCA2RUB1 952 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 ZNF860A6NHJ4 632 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
CTNS-201ENST00000046640 TMCC2O75069 709 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 EPPINO95925 133 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 IL7P13232 177 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 LAMP2P13473 410 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 RORCP51449 518 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 FUT5Q11128 374 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 PGBD2Q6P3X8 592 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 UBE2Q1Q7Z7E8 422 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 SYT14Q8NB59 555 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 OR2L8Q8NGY9 312 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 FAIM2Q9BWQ8 316 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 CDCA4Q9BXL8 241 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 TRPV4Q9HBA0 871 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 KCND3Q9UK17 655 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 A4GNTQ9UNA3 340 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 ASB4Q9Y574 426 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 AP1M2Q9Y6Q5 423 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 LAMA1P25391 3075 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.34□□□□□ -0.43
CTNS-201ENST00000046640 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
CTNS-201ENST00000046640 HOXB2P14652 356 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 PPP2R1BP30154 601 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 OR2G6Q5TZ20 316 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 PAMR1Q6UXH9 720 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 VRK2Q86Y07 508 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 KLHL6Q8WZ60 621 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 TP53INP1Q96A56 240 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 GPR55Q9Y2T6 319 aaPredicted RBP12.34□□□□□ -0.43
CTNS-201ENST00000046640 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.34□□□□□ -0.43
CTNS-201ENST00000046640 V9GYH0 126 aa12.34□□□□□ -0.43
CTNS-201ENST00000046640 MYL12BO14950 172 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 PDE9AO76083 593 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 POU2F2P09086 479 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 OSMP13725 252 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 FRKP42685 505 aaPredicted RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TBC1D19Q8N5T2 526 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 OR1E3Q8WZA6 343 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 C1GALT1C1Q96EU7 318 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ST6GAL2Q96JF0 529 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TMEM168Q9H0V1 697 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 TRPV5Q9NQA5 729 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ACSS1Q9NUB1 689 aaPredicted RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 TMEM74BQ9NUR3 256 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 IL20RAQ9UHF4 553 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ENTPD4Q9Y227 616 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 GPR52Q9Y2T5 361 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 PRSS38A1L453 326 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 CPSF4LA6NMK7 179 aaKnown RBP12.33□□□□□ -0.44
CTNS-201ENST00000046640 FCMRO60667 390 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 RASGRP1O95267 797 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 EGFP01133 1207 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 MMP11P24347 488 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 ACSL1P33121 698 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 CSTF2P33240 577 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTNS-201ENST00000046640 ACTR1BP42025 376 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 CRYBB2P43320 205 aa12.33□□□□□ -0.44
CTNS-201ENST00000046640 AVPR1BP47901 424 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms