RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tuba8Q9JJZ2 449 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 TescQ9JKL5 214 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tnfrsf14A0A1W2P7D5 276 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp934K7N6H3 473 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cry1P97784 606 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ag2Q3UPL5 249 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Elfn2Q68FM6 823 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rnf220Q6PDX6 566 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Q8C4P0 716 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rasgef1bQ8JZL7 473 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cyp51a1Q8K0C4 503 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cdt1Q8R4E9 557 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr551Q8VG23 315 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zfp810Q99K45 461 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 4933436I01RikQ9D3T1 429 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Wdr61Q9ERF3 305 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fgf21Q9JJN1 210 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Orc6Q9WUJ8 262 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Creb3l1Q9Z125 519 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Trip11E9Q512 1976 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tmed7D3YZZ5 224 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Edil3O35474 480 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 SgcbP82349 320 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Txnl4aP83877 142 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 SctQ08535 133 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tgtp2Q3T9E4 415 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cpa6Q5U901 438 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tgtp1Q62293 415 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr774Q7TRI5 312 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ston2Q8BZ60 895 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Cdkl1Q8CEQ0 352 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 B4galt7Q8R087 327 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Med25Q8VCB2 745 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 CrebzfQ91ZR3 358 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gdpd3Q99LY2 330 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rpl14Q9CR57 217 aaKnown RBP11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Nudt17Q9CWD3 296 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ndufaf4Q9D1H6 173 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rnf32Q9JIT1 368 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Smchd1Q6P5D8 2007 aaKnown RBP11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tmem215A7E1Z1 235 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Acbd4E9Q289 327 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tmem38aQ3TMP8 298 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sat2Q6P8J2 170 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Trim69Q80X56 500 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 MdficQ8BX65 247 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pgm2l1Q8CAA7 621 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lims2Q91XD2 341 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Zdhhc4Q9D6H5 343 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mfsd2aQ9DA75 534 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fbxo6Q9QZN4 295 aa11.25□□□□□ -0.61
Pcif1-201ENSMUST00000041643 BC034090A0A087WP46 1202 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr31E9Q3K2 317 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ctla4P09793 223 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rps15P62843 145 aaKnown RBP11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tra2bP62996 288 aaKnown RBP11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Galnt12Q8BGT9 576 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm4922Q8C0N0 497 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hcar1Q8C131 343 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Ly6g5cQ8K1T5 149 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Dennd2dQ91VV4 469 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 3300002I08RikQ9CXH3 147 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 IqchQ9D2K4 1071 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tubb3Q9ERD7 450 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr839-ps1A0A1D5RMH6 312 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 RaxO35602 342 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 DdcO88533 480 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Acvr1P37172 509 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 C2cd4cC2CD4Q5HZI2 419 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr478Q8VG04 314 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc41a3Q921R8 488 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tssk6Q925K9 273 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Kat6aQ8BZ21 2003 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm21497A0A087WRK3 222 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sac3d1A6H687 427 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Adam3F8VQ03 822 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sod2P09671 222 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Serpine2Q07235 397 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Trpc5osQ3UHV4 110 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pin1rt1Q3ULQ2 159 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 HlxQ61670 476 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Dcaf13Q6PAC3 445 aaKnown RBP11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mfsd1Q9DC37 464 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Slc38a3Q9DCP2 505 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hipk2Q9QZR5 1196 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gpc6Q9R087 555 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 PatjQ63ZW7 1834 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fam46aD3Z5S8 447 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm5799E9Q2M1 201 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm2056J3QQ02 144 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Hsf2P38533 535 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pde12Q3TIU4 608 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Chst2Q80WV3 530 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Fam124bQ8BLQ0 456 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Adhfe1Q8R0N6 465 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr1312Q8VF10 317 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr952Q8VFD7 314 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 PmpcaQ9DC61 524 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Olfr955Q9EQ97 314 aa11.24□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pla2g2fQ9QZT4 168 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms